Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1143 ATGTGTTGGGTGTGTGTAGTTGGAAGGATTTCTAGTCCTTTTGATTCTCAACCAGAGGTATGGCCTAATCGAGAGGGAGCCATGAAGGTGATTGAGAGGTATCAAAATTCATATATGCGAGATGAAAAGAGGAATGTGAACCAAGAGAGATTCACCATGCAGATGGTTACCAAAGCTAGGGACCAGCTAAAAAAGATGAAACACGATAATCGTGAGGACGAGCTTAATCTTCTTATGTTCGTTTGCATGCAAAACAATAGTTTATCTATCGATCTGAATGCCGAAGAATTGAAAGATTTTGATAAGTTTGTTGAGAATAAGTTGAAGGAGGTTGGTTGTAAGATTGAGACACTTGATTGA 360 0.3889 MCWVCVVGRISSPFDSQPEVWPNREGAMKVIERYQNSYMRDEKRNVNQERFTMQMVTKARDQLKKMKHDNREDELNLLMFVCMQNNSLSIDLNAEELKDFDKFVENKLKEVGCKIETLD* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1143 119 Coils Coil 56 76 - -
Tpr1g1143 119 PANTHER MADS BOX PROTEIN 2 117 - -
Tpr1g1143 119 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 2 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1143 Tpr-Chr1 10347723 10348082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1143 1 118 MADS-box Gene Family AT5G26630 37.815 1.00e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1143 - - mtr:MTR_5g047560 115.161