Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1134 ATGGCATTACAGTCTTTGTCTTTGGTGATCTTACTGGCATATGGTGCACTGATAACTCTTGTCACATTGACACCATGCTGGTATGTCATGGTCACGCATATCGAGAAACGTGTGAATTTGAACTCAAAAAATATTGTAGACCAATTGCAATCAGAAATTCAGTACTCAGCTCAACTGTTGCATCCAATGAAATCCTCATCAACAAATTTAGCAAGATTGTTGAGTTCATCACTTGATTCTACTAACATCTCTTTCTCTGATATTCAAACCAAGGTTGCTCCATTATTATTTCAAGCATTTGTGACAGTTCCTCACTTAACTCAAATCTCATACATAGGAATGGAAGGTCTCTTTTTCTCATATTGCAGTGATCGCGATCAAGCTCTAGTGATGTTCTCTAATTCATCATCAAATAAACCCTTATACTATATTCAGCAAGCGAATAATGAAACCGGAGAGGTTTTTGGAGAAGCCATAATATCAAACTCCTCTATCAACACAAGTTGGATTAAGGAAGCAGCTAATCTTTCAAATGAATCTGCGTCGTTAGGAAGCAAGTGGAGCAATGACCGCGATCTTTTGTTCCTCAATTCTGCTAGAATCAACAGAATAGGAGTGATTTCGCTAGGATTTACAGCAAAATCAATAACTGATTATGTTACTAGTGTTGACCATCTAGGCACGAGCTCGTATTTAGCTACCAAAGATGGACAAATTCTTGTGGAAGGAATTCAACATATCCTTTTCGTTGTTTTTAATGATTCAGTTTCCTTCCAATCAGTGAATGCAAATGGAGATATGATAAAGAATGAGGGAACTGTCTCATGCAAGAATGAAGCTATTGCTTCTAATTTGAATATTCAAGATAATAGATATCTAATCCATTGCTACCTCATTGATATAATGGGAATAGAATCAGTGTATGTTTTGGCTGTACCACGAAATGGATTTGACGCGAGTTATAAGAAAATCGGATTGGCTCTATTGAATGTAATGATGGTAATGATACTTGTTGCTGTCTTTGGTTTTCTATTTATTGATGGTAGAGCCATAAGAAGAGAAATGCACTTGTGTGCCTCACTCATCAAACAAAAAGAGGCCACACAACAAGCTGAGAAAAAAAACATGAACAAGAGCCTCGCTGTTGCTAGTGCCAGCCACGACGTTCGCACTTCTCTCGCAGGCATTACTGCTCTCATAAAAATTTCGTCTAAGTTAGTTCCTTCTGGTTCAGAATTGGCTTCAAATTTAATCCAAATGGAGGATTGTACACGAGATTTACTAGGACTATTGAACTCTATACTTGACACAAGCAAAATTGAGGTAGGAAAAATGGAACTGAAGGAAGAAGAATTTGATTTATCTCATTTTCTGGAAGAAGTGGTTGATATATACTATCTTGTGGCCATGGAGAAAGGTGTAGAACTTGTATTGGACCCTTGTAATGGTTCTATTATAAAATATTCGCGTGTGAAAGGCGATAAAGGAAGACTTAAACAAGTGTTGTGTAATTTACTGAACAATGCTGTCAAATTTACAAATGAAGGTCACATAACAGTTCGAGCTTGGGCCCAGAAGCCGACATTAAGTAGTTCAATAATCAAAACTAACCAACATAGTTTCATGAAACATTTGTTGCACTTATTTTCGAAGAAAAAAAATGAAGCAGATGAGGAGGACATAGAGAAAACAATGAATTCGATTCAACAAGATTCTCTGCGTTCTATGGATTTCGTGTTTGAAGTGGACGATACAGGAAAAGGAATTTCGAAAGAGAATTACAAGTCTGTGTTTGAGAATTATGTTCAAGTTAAAGAAACTGATCCTGTCCAAGAAGGAACAGGCTTAGGACTTGGAATTGTGCAGTCTTTGGTACGTTTGATGCATGGAGATATTGAAATTGTGGACAAGAATATTGGTGAAAAAGGAACATGTTTCAGGTTCAATGTTCAACTCAGTTTATGCGAAGGAGTAACCGTGACAGATTTTAGTGCAAGGGGAGGTCTTGAGTATGGAACAAGTAACATGAATCCCATGTTACATATTTTCAACTCTAGTCCGAAGATCGAGGCTTCGCGTGTTGTTCTTTTAATTGGAAACAAGGAGCGTCGGAGGACTTGTAAAAGGTTCATGAAGAGCTTAGGGATTAAAGTTAAGGTTGTGAGCTGTCAAGAAGGTTTGTTTGATACTCTAGAGGAGATCAAACAAAAGGATCGCCGTTCCGGTGGCCTGAGCTCTCCAGAATCTTCTTCCAATTTGAGTCCTTCCTCCCATTCCACATCTCATAATTCATTTTCAAGAACCAGAGGTGTTCCTTTGAGTTCTATGGATGGAAATGAGTATACATCACCGGTGTTCAAGAAGATGAATGTTGGAACTGTCTCAGGATTCGTCTTGATTGTCATAGATGCAAATGCAGGACCATCATTTCCTAAACTTTTCAGAATTTCGTTTGTTCCAAGTCATAATGCTTCTTCCTGA 2481 0.3785 MALQSLSLVILLAYGALITLVTLTPCWYVMVTHIEKRVNLNSKNIVDQLQSEIQYSAQLLHPMKSSSTNLARLLSSSLDSTNISFSDIQTKVAPLLFQAFVTVPHLTQISYIGMEGLFFSYCSDRDQALVMFSNSSSNKPLYYIQQANNETGEVFGEAIISNSSINTSWIKEAANLSNESASLGSKWSNDRDLLFLNSARINRIGVISLGFTAKSITDYVTSVDHLGTSSYLATKDGQILVEGIQHILFVVFNDSVSFQSVNANGDMIKNEGTVSCKNEAIASNLNIQDNRYLIHCYLIDIMGIESVYVLAVPRNGFDASYKKIGLALLNVMMVMILVAVFGFLFIDGRAIRREMHLCASLIKQKEATQQAEKKNMNKSLAVASASHDVRTSLAGITALIKISSKLVPSGSELASNLIQMEDCTRDLLGLLNSILDTSKIEVGKMELKEEEFDLSHFLEEVVDIYYLVAMEKGVELVLDPCNGSIIKYSRVKGDKGRLKQVLCNLLNNAVKFTNEGHITVRAWAQKPTLSSSIIKTNQHSFMKHLLHLFSKKKNEADEEDIEKTMNSIQQDSLRSMDFVFEVDDTGKGISKENYKSVFENYVQVKETDPVQEGTGLGLGIVQSLVRLMHGDIEIVDKNIGEKGTCFRFNVQLSLCEGVTVTDFSARGGLEYGTSNMNPMLHIFNSSPKIEASRVVLLIGNKERRRTCKRFMKSLGIKVKVVSCQEGLFDTLEEIKQKDRRSGGLSSPESSSNLSPSSHSTSHNSFSRTRGVPLSSMDGNEYTSPVFKKMNVGTVSGFVLIVIDANAGPSFPKLFRISFVPSHNASS* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1134 826 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 432 650 IPR036890 -
Tpr1g1134 826 PANTHER HISTIDINE KINASE CKI1-LIKE 33 814 - -
Tpr1g1134 826 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 365 445 IPR036097 GO:0000155|GO:0007165
Tpr1g1134 826 ProSiteProfiles Histidine kinase domain profile. 384 654 IPR005467 -
Tpr1g1134 826 MobiDBLite consensus disorder prediction 743 772 - -
Tpr1g1134 826 CDD HisKA 375 439 IPR003661 GO:0000155|GO:0007165
Tpr1g1134 826 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 652 IPR003594 -
Tpr1g1134 826 PRINTS Bacterial sensor protein C-terminal signature 578 592 IPR004358 GO:0016310|GO:0016772
Tpr1g1134 826 PRINTS Bacterial sensor protein C-terminal signature 596 606 IPR004358 GO:0016310|GO:0016772
Tpr1g1134 826 PRINTS Bacterial sensor protein C-terminal signature 612 630 IPR004358 GO:0016310|GO:0016772
Tpr1g1134 826 PANTHER TWO-COMPONENT HISTIDINE KINASE 33 814 - -
Tpr1g1134 826 Gene3D - 348 441 - -
Tpr1g1134 826 Gene3D - 442 657 IPR036890 -
Tpr1g1134 826 SMART HKATPase_4 493 654 IPR003594 -
Tpr1g1134 826 MobiDBLite consensus disorder prediction 738 772 - -
Tpr1g1134 826 SMART HisKA_10 377 443 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1134 Tpr-Chr1 10262073 10265519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1134 11 810 Histidine Kinase Gene Family AT2G47430 39.906 2.46e-173 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1134 - - cam:101504256 1212.59