Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1123 ATGCAAGGTGCTGGTGTTATTGGTAATCGAGCAATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTAAAGATTCAAATGAGTTCTTCCTCTAACAATGGTGCTGCTGGTGCTCCGAATATTCAGAGATCCAAAAGCTTTGCTTTTAGAGCTCCTCAGGAGAATTATACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAGGAAGAAGGACACAGGAGTTGTGTATGCATTGAAGATCATGGACAAAAAATTTATTACCAAAGAAAACAAAACTGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGATCATCCTGGCATTGTGCGACTATATTTCACATTTCAAGACTCATTTTCTCTGTACATGGCACTTGAATCATGTGAAGGTGGAGAACTTTTTGATCAAATTACCAGGAAGGGTCGTTTACCCGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTCGATGCTCTTGAATACATACATGGTTTGGGAGTTATACATCGTGATATTAAGCCAGAGAACCTATTACTTACATCTGAAGGACACATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAGTTACTGTCCTTCCGAATGCAGCATCAGATGACAAAGCCTGCACATTTGTGGGAACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCTCCCGCAACTTTTGGAAATGACCTCTGGGCACTTGGCTGCACATTATATCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAGAGAATTATAGCAAGAGAAATTCGATTTCCAGATTACTTTTCAGACGAAGCAAGAGACCTTATTGACAGGCTGTTGGATTTAGACCCCACCAGGAGACCAGGTGCAGGACCTGATGGTTATGCTATTTTGAAAATACATCCATTTTTCAAGGGGGTTGACTGGAATAACTTAAGGGCACAAACTCCTCCAAAACTTGCTCTGGAACCCGGGACTCAATCGCCTGCTGATGAGTCATCATGGAGTCCTTCTCACATTGGTGATGGTTCTGCTAGACAGCCTGATGGTTCCACATCGTCTGCAGAGGGAACTGGTCACATAACCAGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGAGCCTGGTGAATCTGTTCTTATGATCTCAATGGTGAAGAAATTACAAAAACTATCAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCAAAGTTGATCTATGTCGACCCTTCAAAATTAATTGTAAAGGGAAATATAATATGGTCTGATAATCCCAATGATTTAAACATTCAAGTGACTAGTCCCTCACATTTCAAGATTTGCACACCTAAAAAGGTAATGTCATTCGAGGATGCTAAGCAAAGAGCATCTCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA 1500 0.4113 MQGAGVIGNRAMLEMEKDFDSKLKIQMSSSSNNGAAGAPNIQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRARKKDTGVVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDSFSLYMALESCEGGELFDQITRKGRLPEDEARFYAAEVVDALEYIHGLGVIHRDIKPENLLLTSEGHIKIADFGSVKPMQDSQVTVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSDEARDLIDRLLDLDPTRRPGAGPDGYAILKIHPFFKGVDWNNLRAQTPPKLALEPGTQSPADESSWSPSHIGDGSARQPDGSTSSAEGTGHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLSSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLNIQVTSPSHFKICTPKKVMSFEDAKQRASQWKKAIEGLQNR* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1123 499 ProSiteProfiles Protein kinase domain profile. 61 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1123 499 Gene3D - 375 499 IPR011993 -
Tpr1g1123 499 MobiDBLite consensus disorder prediction 351 381 - -
Tpr1g1123 499 Gene3D Transferase(Phosphotransferase) domain 1 145 341 - -
Tpr1g1123 499 Coils Coil 479 499 - -
Tpr1g1123 499 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 35 495 - -
Tpr1g1123 499 CDD STKc_PDK1 59 328 IPR039046 GO:0004674
Tpr1g1123 499 Pfam PH domain 396 498 IPR033931 -
Tpr1g1123 499 Pfam Protein kinase domain 63 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1123 499 Gene3D Phosphorylase Kinase; domain 1 59 144 - -
Tpr1g1123 499 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 495 - -
Tpr1g1123 499 SUPERFAMILY Protein kinase-like (PK-like) 58 360 IPR011009 -
Tpr1g1123 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Tpr1g1123 499 MobiDBLite consensus disorder prediction 346 381 - -
Tpr1g1123 499 SUPERFAMILY PH domain-like 322 498 - -
Tpr1g1123 499 SMART serkin_6 61 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1123 Tpr-Chr1 10162980 10169268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1123 12 499 AGC Kinase Gene Family AT3G10540 81.874 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Tpr1g1123 Pkinase 2.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1123 K06276 - gmx:100788780 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1123 1 10162980 10169268 Tpr1g1123 1 10162980 10169268 ECH