Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1116 ATGGATTATGTCAGTAGTACAATGATCCTTTTGATGACATGCGTTGTCACATACTTTCTTGGTTCACTTTATGCAAGAAGCAAAAATTCAAATAAGCTTCCACCAGGACCTTCCATTTTCACTATCATGTCACATGTTTTTGAATTATACTATAAGCCACAACAAACACTTGCTAAATTTGCTAAGTTTTATGGTCCTGTTATGCTTATTAAATTATGCACTGAGACCACTGTGATTATTTCATCATCAGATATGGCCAAAGAAATTCTCCATACTAATGATTCTTTGTTCACAGATAGATCTGTTCCTGATAACGCAACTACTCATAATCACGACAATTTTAGCGTAGTCTTTCTCCCATATTCACCTCTTTGGCAACACCTTAGAAAAATATGTCACAATAATTTACTCTCTAATAAGACTCTTGATGGAAGTCAAGAACTTAGACGTATGAAATTGAAAGATCTTCTTAATGATATGCATAAAAGCAGCTTAACTGGTGAAACTGTTGATATTGGAAGAGCTGCTTTTAAAGCTTGCATTAATTTTTTGTCATATACTTTTGTGTCTCAAGATTTTGTTGAGTCTTTGGATGATGAATATAAGTATATAGTGTCAACTCTCTTGAGTTCTGTTGGAACACCAAACATTGCTGATCATTTCCCTATATTGAAGATTCTTGACCCACAAGGTATTAGAAGGCACACTGATAAATATTTTGCAAAAGTGTTTTATGCCTTTGATGTCATAATTGAGAAAAGAATGAAGCTAAGACAAAGTGAAGATTATGTCTCAATGAATGACATGTTAGACTCATTGTTGGATATTTCCAAAGAAGATAGCCAAAAGATGGATAAAAATCTGATTAAACATCTATTATTTGATCTGCTTGTGGCGGGAACAGATACTTCAGCACTTGGATTAGAAAGGGCCATGACTCGTCTAGTACACCATCCAGAGGCTATGTCAAAAGCAAAAAAGGAACTTGAGGAAATTATTGGATTAGGAAATCCAATTGAGGAATCCGACATTGACAGACTTCCATACTTAAACGCAGTGATAAAAGAGAGTTTGCGTTTACACCCTCCAGCTCCAATGTTGCTTCCTCGAAAAGCAAGAGTAGATGTGGAAATATCCGGGTACACAATTCCAAAAGGTGCACAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAGACATATGGGATGATGCTGATTCGTTTTCACCTGAAAGATTTTTAGGATCTGAAATTGATGTCAAAGGTCGACACTTTAAACTTACGCCGTTTGGTAGTGGAAGACGAATATGTCCCGGCTCACCACTTGCTGTTAGAATGTTACATTTGATGTTGGGATCATTAATCAATTCCTTTGATTGGAAACTTGAAAATAATATGGAAGCTAAGGACATGAACTTGGACAAACCTCTAAGAGCTATTCCAGTTGCACTAAACAAAGTATATTAA 1467 0.3572 MDYVSSTMILLMTCVVTYFLGSLYARSKNSNKLPPGPSIFTIMSHVFELYYKPQQTLAKFAKFYGPVMLIKLCTETTVIISSSDMAKEILHTNDSLFTDRSVPDNATTHNHDNFSVVFLPYSPLWQHLRKICHNNLLSNKTLDGSQELRRMKLKDLLNDMHKSSLTGETVDIGRAAFKACINFLSYTFVSQDFVESLDDEYKYIVSTLLSSVGTPNIADHFPILKILDPQGIRRHTDKYFAKVFYAFDVIIEKRMKLRQSEDYVSMNDMLDSLLDISKEDSQKMDKNLIKHLLFDLLVAGTDTSALGLERAMTRLVHHPEAMSKAKKELEEIIGLGNPIEESDIDRLPYLNAVIKESLRLHPPAPMLLPRKARVDVEISGYTIPKGAQVLINEWAIGRTDIWDDADSFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNMEAKDMNLDKPLRAIPVALNKVY* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1116 488 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 SUPERFAMILY Cytochrome P450 34 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 485 - -
Tpr1g1116 488 Pfam Cytochrome P450 34 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 485 - -
Tpr1g1116 488 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1116 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Tpr1g1116 488 Gene3D Cytochrome P450 20 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1116 Tpr-Chr1 10083720 10085769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1116 1 475 Cytochrome P450 AT2G45550 39.754 3.50e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1116 - - gmx:100800810 640.573