Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1082 ATGGAATTTATAACTTGTGCATTACTCCTTCTCTTGACATGTACCACACTTCATTTCCTTAGTAGAATCATAAAACCAAACCATAATCTTCCGCCGGGCCCAACCCGTTTTCCGATCATCGGAAACCTCTTTGAACTTGGAGAAAAACCACACCAATCTTTAGCCAAACTAGCAAAGATTCATGGTCCAATAATGAGCCTAAAACTAGGAAGAATAACAACTATAGTAATTTCTTCAGCTGAAATGGCCAAAGAAGTGCTATTAACTCATGACCAATTCTTGTCAAATAGAACAATTCCTCAATCTGTTTCTGTTCTCAACCATGAACATTTTAGCCTTGCTTTCATACCCGTTTCGCCACTTTGGCGCGAGTTGAGAAAAATATGCAATAGCCAATTATTTGCACATAAGACTCTTGATGAAAGCCAAGATGTAAGGCGCAATAAAGTTCAACTACTTCTTCATGATGTGCACAAAAGTAGCCAAATTGGTGAAGCAATAGACATTGGAAACGAAGTATTCAAAACGACGATAAATTTATTATCGAACACTATTTTCTCTGAAGATTTGATTCAATCTACCGGAACAGCCGGAGAGTTTAAGGACTTGGTTACAAACATTACAAAATTAGTTGGATCACCAAACATAGCTGATTTTTTCCCATTGCTCAAGGTCATTGATCCTCAAGGTGTGAAAAGACAACAAACTAAGAATGTTGCTAAGGTGTTGGACGTCTTCGATCGATTGATTCGGAAACGTTTGAAGTCGATGGATGAAGATTCTAACACACACAATGACATGTTAGATGCCTTGCTGAATATTTCTAAAGAAAATGATATGATGGACAAAAACCTAATTGAACATTTGGCACATGATATTTTTGTCGCGGGAACGGACACAACAACATCAACACTTGAATGGGCAATGACGGAACTAGTACTCAACTCAGAGATCATGTCAAAAGCAAAAAAGGAGCTAGAAGAAGTAATAGGCAAAGGTAAACCTATTGAAGAATCAGATATTGCTAGACTCCCGTATCTGCAAGCAATCATAAAAGAGACATTTCGATTGCACCCTCCAGTTCCTCTTTTGCTCCCTCGAAAAACAGCAAAAGACGTGGAGCTATGTGGTTTCACCATCCCAAAAGATGCGCAAGTGTTAATTAATGTGTGGACTATTGGTAGAGATCCAACTTTGTGGGACAATCCAACTTTGTTCTCACCTGAAAGATTTGTTGGGTCAAATATTGATGTAAAGGGTAGGAGTTTTGAACTCGCGCCATTTGGTGCTGGAAGAAGAATATGTCCCGGTATGATGTTAGCTTTAAGGATGTTGCTTTTGATGTTAGGGTCATTGATCAACTCCTTTGATTGGAAACTTGAAGATGACATGAAATCAGAAGATATGGACATGGACGAAAAATTTGGAATTACCTTGCAAAAGGCACAACCTCTTCGAGTTGTTCCTGTTAAGATTAGCATTTAA 1485 0.3838 MEFITCALLLLLTCTTLHFLSRIIKPNHNLPPGPTRFPIIGNLFELGEKPHQSLAKLAKIHGPIMSLKLGRITTIVISSAEMAKEVLLTHDQFLSNRTIPQSVSVLNHEHFSLAFIPVSPLWRELRKICNSQLFAHKTLDESQDVRRNKVQLLLHDVHKSSQIGEAIDIGNEVFKTTINLLSNTIFSEDLIQSTGTAGEFKDLVTNITKLVGSPNIADFFPLLKVIDPQGVKRQQTKNVAKVLDVFDRLIRKRLKSMDEDSNTHNDMLDALLNISKENDMMDKNLIEHLAHDIFVAGTDTTTSTLEWAMTELVLNSEIMSKAKKELEEVIGKGKPIEESDIARLPYLQAIIKETFRLHPPVPLLLPRKTAKDVELCGFTIPKDAQVLINVWTIGRDPTLWDNPTLFSPERFVGSNIDVKGRSFELAPFGAGRRICPGMMLALRMLLLMLGSLINSFDWKLEDDMKSEDMDMDEKFGITLQKAQPLRVVPVKISI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1082 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Tpr1g1082 494 Pfam Cytochrome P450 31 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 493 - -
Tpr1g1082 494 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 493 - -
Tpr1g1082 494 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g1082 494 Gene3D Cytochrome P450 22 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1082 Tpr-Chr1 9736275 9738172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1082 1 491 Cytochrome P450 AT2G45550 45.562 4.18e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1082 - - gmx:100798291 795.038