Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1054 ATGGCTAGGATTAAACCTCAGGCTCTGTTACAGCAAAGCAAAAGGAAGAAAGGACCTTCACGTTTAAGTGCAGCAACTATTATATTTTACTCTTTGATTCTTCTCTTGGTTGGTTTTTTCCTTTTGGCTACATACAGACACTGGTCCAACAGGTCAAGATTGCAATCAGAAAGTCACATGACAGTATCTGATGAGGGTGAAAATAGTTTTGTGGACTCGAAGAAATCTGAGCTACCTGGATATGCTGTTTTAAATACCTCTAAAGGGTCTATAATAGTAGAACTGTACAAGGAAAGTGCTCCTGAAGCTGTTGATGAATTTATTGACTTATGTCAAAAAGGGCACTTCAAAGGTATGCTTTTTCAGCGCGTAATTAAGCACTATGTTATTCAGGCAGGGGAGGGTGAGGGTCATGGAACAGGAGCAGCTGATTGGAACTTAAGAGGAAAGCAACCTGCAAGTATGAAACACGAAGCATTCATGCTTGGAACATCCAAGGGCAAACACACCAACAAAGGATTTGATCTTTTCATTACAACTGCACCGATACCAGATCTTAACGAGAAACTTATTGTGTTTGGGCAAGTCGTCAAGGGAGAGGATGTTGTTCAGGAAATTGAAGAAGTGGATACTGATGAACATTACACACCTAAAATATCTATTGGGATACTTGATGTGACTCTCAAACAGAAGATCTGA 699 0.4006 MARIKPQALLQQSKRKKGPSRLSAATIIFYSLILLLVGFFLLATYRHWSNRSRLQSESHMTVSDEGENSFVDSKKSELPGYAVLNTSKGSIIVELYKESAPEAVDEFIDLCQKGHFKGMLFQRVIKHYVIQAGEGEGHGTGAADWNLRGKQPASMKHEAFMLGTSKGKHTNKGFDLFITTAPIPDLNEKLIVFGQVVKGEDVVQEIEEVDTDEHYTPKISIGILDVTLKQKI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1054 232 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 78 228 IPR002130 GO:0000413|GO:0003755
Tpr1g1054 232 CDD cyclophilin 83 225 - -
Tpr1g1054 232 SUPERFAMILY Cyclophilin-like 79 228 IPR029000 -
Tpr1g1054 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 95 110 IPR002130 GO:0000413|GO:0003755
Tpr1g1054 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Tpr1g1054 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 175 187 IPR002130 GO:0000413|GO:0003755
Tpr1g1054 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 188 203 IPR002130 GO:0000413|GO:0003755
Tpr1g1054 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 232 - -
Tpr1g1054 232 Gene3D - 67 232 IPR029000 -
Tpr1g1054 232 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 83 226 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1054 Tpr-Chr1 9317535 9323533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1054 80 228 U-box Gene Family AT5G67530 31.818 1.82e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1054 - - gmx:100803596 382.489