Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1024 ATGTGCAAATCAAAAAAGAGCACCACCGTGGTACAACCCACAAGAAGAATCTCAACATCATCATCTTCCACAACAAATTTCCCATCTTCTTCCAACAACACCGAAGTCCCAATCACAGAATCAAAAAGTTACATCTACGGTGATAAACAATGGTCCAAAACTTCTTCATCAGTTTCAAGCCACTCTTCTCTTTCAAGCCTCAAACAATCTCTCCCAGAAAATCCTCACATCTATCCTTTCTCAGAAATCTCAACCGCCACAGCTAACTTCTCCACTAACCGTCTCTCCACAAATTCATTCCGTTGTTATCTCCGAGACCGCGACGTCGTTATTTTCCAGCGGAAATTCCGCCGGAAAATTGACTTACCGGAGATACGTGATCGTCTTGCTCTTATCTGCCGGAGTCATCATAGCAGTCTCGTGAAGCTTCTCGGAGCTTCTGTCTCCGGTGGCTACATTTATCTTGTATATGAATTTGTTCCCGGTGGTAGTCTTTCCGATTGTCTTCGAAATCGTCGGAACCCTAGCTTCACGAATCTCTCGACGTGGAGTTTGAGGATGCAAATTGCTTCTGATCTCGCTCACGGTCTTGATTATGTTCATAATTCTTCAGGTTCGGGTAACGGTTTCGTTCATAATCATATTAAAAGCTCTAGTATCATCGTCTCAGAGGAGAATTTCGGAGCTAAGATTTGTCACTTCGGTACATCGGAGCTCTGCGGCGAGTCTGTTACCGTCGGAGATTCTTCTGCATCGGAGAAAAATTTGAAAAGGTCCGGTAGCCGGGGGGTGAGATTTGAGGGGACGAGGGGCTACATGGCGCCGGAATTTCAATTAACCGGCGTTGCGACGCAGAAGACCGACGTGTATGCTTTCGGCGTGGTGGTTTTGGAGCTTCTGAGCGGGTTAGAGGCGGTGAGATTTGAATTGGAGGGAAATGATGGCGGGTATAGGAGGGTGAGTGTGGTGGATACGGCGAGGGAAGCGTCGAAGGAGCACGGTGGCGTGAGAAAATGGGTTGATCGGAGGTTGAGGGATTCGTTTCCGATGGATGTGGCTGAGAAAATGATTCGGGTCGGGTTGGAATGTGTTGAGGATGATCCAAATGAGAGACCGGGTATGGGTCGGGTATCGATGGAAGTATCCAAGTTGTATTTGGAATCAAAGGAGTGGGAAGAGAAATTGGGTACTAACATTGATATTTCGGTCTCATTAGCCCCACGCTAA 1227 0.4711 MCKSKKSTTVVQPTRRISTSSSSTTNFPSSSNNTEVPITESKSYIYGDKQWSKTSSSVSSHSSLSSLKQSLPENPHIYPFSEISTATANFSTNRLSTNSFRCYLRDRDVVIFQRKFRRKIDLPEIRDRLALICRSHHSSLVKLLGASVSGGYIYLVYEFVPGGSLSDCLRNRRNPSFTNLSTWSLRMQIASDLAHGLDYVHNSSGSGNGFVHNHIKSSSIIVSEENFGAKICHFGTSELCGESVTVGDSSASEKNLKRSGSRGVRFEGTRGYMAPEFQLTGVATQKTDVYAFGVVVLELLSGLEAVRFELEGNDGGYRRVSVVDTAREASKEHGGVRKWVDRRLRDSFPMDVAEKMIRVGLECVEDDPNERPGMGRVSMEVSKLYLESKEWEEKLGTNIDISVSLAPR* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1024 408 PANTHER OS09G0572100 PROTEIN 1 408 - -
Tpr1g1024 408 Pfam Protein tyrosine and serine/threonine kinase 123 377 IPR001245 GO:0004672|GO:0006468
Tpr1g1024 408 PANTHER OS09G0572100 PROTEIN 1 408 - -
Tpr1g1024 408 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Tpr1g1024 408 Gene3D Transferase(Phosphotransferase) domain 1 160 403 - -
Tpr1g1024 408 ProSiteProfiles Protein kinase domain profile. 89 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1024 408 MobiDBLite consensus disorder prediction 1 39 - -
Tpr1g1024 408 SUPERFAMILY Protein kinase-like (PK-like) 118 381 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1024 Tpr-Chr1 9007991 9010585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1024 73 398 Receptor kinase-like Gene Family AT1G51940 33.728 6.97e-48 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr1g1024 PK_Tyr_Ser-Thr 2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1024 - - mtr:MTR_1g094730 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1024 1 9007991 9010585 Tpr1g1024 1 9007991 9010585 ECH