Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1020 ATGGATATCACAATAACATCAAAAGAAATAATCAAACCATCATTGCCAACACCAAATGAACACAAATTCTTCAAACTATGTCTCTTTGATCAGCTTCAATTAATCACTTATTTACCAATGGTTCTGTTTTACCCCAAAAAAGAAGGCCTAACAGAAATTTCCCATTTCATTGCTCAATTGAAAAAATCACTTTCTGAAACACTAACCATTTTCTACCCTATAGCAGGTAGAAGAAAAGATCAAACATTTATCACTTGTAATGATGAAGGTGCTGTTTACTTGGAAGCCAAGGTAAACCATACCATGGTTGAATTTCTCAATCCACCTAAGCTAGAATTTCTAAATAAATTGCTTCCATGTGAGCCTAATAAGATGCATCAAAATGGAGAAGATTTACCACAAGTACTTGTACAAGTTAACATGTTCAATTGTGGTGGAATAGCTATAGGTACTTGTCATCTTCATACCCTCCTTGACGGATGTTCCGGCAGCCTTTTCCAAACTACTTGGGCTGCCATTTGTCGAGGCTGCTCTAGCGACGAATTACCACACCCCGATTTCTTTACCGCTTCTTCTTGTTTTCCAACAATAAATCATGGTGGTAAGAATACTAATGAGAGCTTTGATGGACAAAAAAAATGTAGCACAAGAAGATTTGTGTTTGGTTCCGAATCAATCGACACTCTAAGAGATAAAGCAAAAGACGACGATGACAATGACAATGATGATGGAAGATCAAAGTTTCCTACAAGATATGAAGCATTGGCTGCTTTTATTTGGAAACACATGACACTTGCATGTAAAATTGAAGGAGGTGTAGATAGCAAAAGACCAACATTGGCTATACATATTGTGGACATGAGGAGAAGAATGGGTGAGCCTTTTTCTAAATACACAATAGGCAACATTTTGTGGCCAGTGATGGTGTTATGTGAAAAAGTTAATGAAGAAACTAATATTAAACATTTAGTTAAAATTTCTAAGGAGAAATTTAGTAAAATTTCAAGGGAATTGTTTTTAAGAGTGAAGAATGATCCAAGTATATTAGGGAGCAATGAATGTGTGGATTTGCCACAAGGTATAGAAACAATAAGTCCAATTCCAGTTGTTTTGACAAGTTGGTGTGGTTTGAATTTTAGTGAGCTTGATTTTGGTTGGGGGAAGCCATTTTGGGTTGGTGTTAGAGGTGGTGATCAAGAAACTCTTCCTAATGTAGCTGTTATTATGGAAACAAATGAAGGCATGGAAGCTTGGGTGACAATGGAAATGCAACATATAGCTAACTTGGAAAATGATATGGAGTTTCTTAAATTAGCTTTGTCTAATCCTAGTGTTTCAAATGTTTAG 1347 0.3586 MDITITSKEIIKPSLPTPNEHKFFKLCLFDQLQLITYLPMVLFYPKKEGLTEISHFIAQLKKSLSETLTIFYPIAGRRKDQTFITCNDEGAVYLEAKVNHTMVEFLNPPKLEFLNKLLPCEPNKMHQNGEDLPQVLVQVNMFNCGGIAIGTCHLHTLLDGCSGSLFQTTWAAICRGCSSDELPHPDFFTASSCFPTINHGGKNTNESFDGQKKCSTRRFVFGSESIDTLRDKAKDDDDNDNDDGRSKFPTRYEALAAFIWKHMTLACKIEGGVDSKRPTLAIHIVDMRRRMGEPFSKYTIGNILWPVMVLCEKVNEETNIKHLVKISKEKFSKISRELFLRVKNDPSILGSNECVDLPQGIETISPIPVVLTSWCGLNFSELDFGWGKPFWVGVRGGDQETLPNVAVIMETNEGMEAWVTMEMQHIANLENDMEFLKLALSNPSVSNV* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1020 448 Pfam Transferase family 1 435 - -
Tpr1g1020 448 Gene3D - 211 439 IPR023213 -
Tpr1g1020 448 Gene3D - 1 202 IPR023213 -
Tpr1g1020 448 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 443 - -
Tpr1g1020 448 PANTHER F21J9.9 5 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1020 Tpr-Chr1 8968311 8969657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1020 1 430 Monolignol Biosynthesis Gene Families AT5G48930 23.747 3.61e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1020 - K13065 gmx:102668997 682.559