Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1015 ATGGCAAAGAAAACTCACTCTTCTCGTCAACCTTCATCACAAACCCCTCATGCAAAAACACTACCAACACCCCCTCCTTCAAAACCTGAACCCCCTTCTCAACCACCTCCTCCTCCTTCTAACCCCTCCCGTCCTAACCGTTCCAAGAAGCCAACACCTATCGCCGCCGCTGCTGCTGCCGCTAAATCCTCCAAATCTCATATCGCTTTCTCCCAAAATGATGTAATCCTTATTCTCAAAGCTCTTCTAGATTTCAAATCTCAAACTGGAAACGACCCAGACAAAGACTTCAAAGCTTTTCATGAGTCATTGAAGGATTCACTTAGCATCAAAACTACAGTGAGGAAGCTCAGAGAAAAAGTTCGAGTTTTGAAGCTGAAATTTGACAAGTATTGTCAAAACAATGAAAAAGATCTTACTTTTTCTAGCTCTTATGAGAAAGAAGCTTTTGAACTTTCTCAGAAATATTGGGGTCAAGAGAAAAAAGTTGAAGAAAAAGAAAAACAACCCAAAAAGAAGTCTTTGAAAATAGTTGAAGAAAAAGAAAAACAACAACCCAAGAAGAAAATTGTTGCTAAGAAACCTGCTAAGGAAGAATCTGCAAAAGGGGAAAGTAGTGGTAAAATGGGTCATGTTAATTTGAGTGAAAGTTTTGATTTTGATGAAACGTGTATGGGTTTGAATATGTTGAAGAGGGGGATGGAGTTGCTTGGGGAAGAAAAGAGGGAAGAGTTGGAAACAAGGTGGAAGAAGTTGAAAGTTCGGGAAATGGAAGTGTTAGTGATGCGTGCTGAGTTAGTTAAAGATCATGCTAGATTGATCTTGAATGAATTAGAAGGATGA 843 0.3938 MAKKTHSSRQPSSQTPHAKTLPTPPPSKPEPPSQPPPPPSNPSRPNRSKKPTPIAAAAAAAKSSKSHIAFSQNDVILILKALLDFKSQTGNDPDKDFKAFHESLKDSLSIKTTVRKLREKVRVLKLKFDKYCQNNEKDLTFSSSYEKEAFELSQKYWGQEKKVEEKEKQPKKKSLKIVEEKEKQQPKKKIVAKKPAKEESAKGESSGKMGHVNLSESFDFDETCMGLNMLKRGMELLGEEKREELETRWKKLKVREMEVLVMRAELVKDHARLILNELEG* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1015 280 MobiDBLite consensus disorder prediction 1 67 - -
Tpr1g1015 280 PANTHER BNAANNG10740D PROTEIN-RELATED 7 279 IPR007592 GO:0006355
Tpr1g1015 280 PANTHER STOREKEEPER PROTEIN 7 279 - -
Tpr1g1015 280 MobiDBLite consensus disorder prediction 18 46 - -
Tpr1g1015 280 MobiDBLite consensus disorder prediction 161 205 - -
Tpr1g1015 280 MobiDBLite consensus disorder prediction 1 17 - -
Tpr1g1015 280 Pfam Protein of unknown function, DUF573 69 158 IPR007592 GO:0006355
Tpr1g1015 280 MobiDBLite consensus disorder prediction 161 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1015 Tpr-Chr1 8930255 8931511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1015 70 279 GeBP Transcription Factor Family AT4G25210 31.034 1.62e-17 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr1g1015 DUF573 9.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1015 - K04728 cam:101514741 160.614