Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0993 ATGGGTTATTCTATATTCTATGTTGTTTTGTTTTTATCAATTGTTTGTGTTGGAATTTCATTGGCTTTTAACATAGAAGATCAAAAGAGAGACAAGATTGGTTGGTTACCAGGACAACCAAATATGAATGTTGAATTTGAACAGTATTCAGGTTATGTGACTGTGAATGAAAAGAGTGAAAGAGCATTGTTTTATTGGTTGATTGAAGCACCACTGAATCGTGGACCTAATTCTAGGCCACTAGTTTTATGGCTTAATGGTGGTCCTGGTTGTTCTTCCATTGCTTATGGTGCTTCTGAAGAAATTGGTCCTTTTCATATTAAGTCTGATGGCAAAACACTTTTCTTGAATCCTTATGCTTGGAATAATTTGGCAAATTTATTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCTTATTGTAATAAATCAACAGATCTGTATACATTTGGTGACAAAAAAACAGCTGAGGATGCATATATTTTTCTAGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGGGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGGCTCAGCTTGTTTACCGGAGAAATAAAGGAATCAATAATCCAGATATCAATTTTAAGGGATTTCTGGTTGGAAATGGTGTTACTGATGATTATCATGATTATGTTGGGACATTTGAGTACTGGTGGACACATGGTTTGATTTCAGATTCAACATATAGGAATCTAAGAATTGCATGTGACTTTGGATCATCTCAGCATCCATCAGTGCAATGTATGCAGGCTACTAGACTTGCAGTTGCTGAGCAAGGAAACATTGACCCATATAGCATTTATACACTGCCTTGTAACAATACCGGATCGCTCGGACGCAGCTTGAACGGTCGTTATCCATGGATGTCTAGAGCGTATGATCCGTGTACCGAAAGGTATTCTGATTTGTATTACAATCGTCCGGAAGTTCAAAAGGCACTTCATGCCAATGTAACTGGTATTCCATATATATGGAAGACATGCAGTGATGTTGTTGGGAATTATTGGACTGATTCTCCACTGTCTATGCTTCCTATATATCGAGAACTTATTAATGCCGGTCTAAAGATATGGGTATTCAGTGGAGACACCGATGCTGTAGTTCCCGTCGCCGCAACTCGATACTCTATTGATGCCTTGAAGCTTCCAACCATCATCAACTGGTACCCTTGGTATGACAGTGGCAAGGTTGGTGGATGGAGTCAAGTTTATAAAGGGCTCACATTGGTTACAGTAAGAGGTGCAGGACACGAGGTTCCTCTTCATAAGCCTCGCGAAGCATTTATTCTTTTTAGATCATTCTTGGAGAACAAGTACATGCCATCAAGCTAA 1380 0.387 MGYSIFYVVLFLSIVCVGISLAFNIEDQKRDKIGWLPGQPNMNVEFEQYSGYVTVNEKSERALFYWLIEAPLNRGPNSRPLVLWLNGGPGCSSIAYGASEEIGPFHIKSDGKTLFLNPYAWNNLANLLFLDSPAGVGFSYCNKSTDLYTFGDKKTAEDAYIFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQLVYRRNKGINNPDINFKGFLVGNGVTDDYHDYVGTFEYWWTHGLISDSTYRNLRIACDFGSSQHPSVQCMQATRLAVAEQGNIDPYSIYTLPCNNTGSLGRSLNGRYPWMSRAYDPCTERYSDLYYNRPEVQKALHANVTGIPYIWKTCSDVVGNYWTDSPLSMLPIYRELINAGLKIWVFSGDTDAVVPVAATRYSIDALKLPTIINWYPWYDSGKVGGWSQVYKGLTLVTVRGAGHEVPLHKPREAFILFRSFLENKYMPSS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0993 459 Gene3D alpha/beta hydrolase 27 290 IPR029058 -
Tpr1g0993 459 SUPERFAMILY alpha/beta-Hydrolases 36 457 IPR029058 -
Tpr1g0993 459 Gene3D - 359 452 - -
Tpr1g0993 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Tpr1g0993 459 Gene3D - 312 348 - -
Tpr1g0993 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 458 IPR001563 GO:0004185|GO:0006508
Tpr1g0993 459 PANTHER CARBOXYPEPTIDASE 14 458 - -
Tpr1g0993 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Tpr1g0993 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Tpr1g0993 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Tpr1g0993 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Tpr1g0993 459 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Tpr1g0993 459 Pfam Serine carboxypeptidase 42 453 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0993 Tpr-Chr1 8641151 8645087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0993 322 454 Calmodulin-binding Proteins AT2G22960 29.104 2.45e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0993 K16297 - gmx:100805722 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0993 1 8641151 8645087 Tpr1g0993 1 8641151 8645087 ECH