Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0989 ATGCCGCCGGAACCTTTGCCTTGGGATCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAGTCGTTAGGGTCGGTGGCTAGATGGAGAGATTCGTCTCATCATAGAGACTTTAATCGATGGGGATCCGCCGATTTTCGCAGACCACCGGGTCATGGTAAGCAGGGTGGTTGGCACATGTTTTCTGAAGAGCCTGGTCATGGTTATGGGGTTTCTAGGTCCGGTGACAAGATGTTGGAGGAAGATAGCCGGCCGTCAATTTCACGGGGTGATGGAAGATATGGCAGGAGTAGTAGGGATAATAGAGGAGGTCCCTTTGGCCAGAGAGATTGGAGAGGTCATTCTTGGGAGGTCACCAATGGCTCTCCGAATTTGTCTAGGAGGCCACAAGATATGAATAATGACCAGAGGTCAGTTGATGATTCCCTAACATATTCCTCTCAACCACATTCTGATTTTGTAAACACTTGGGAACAACATCAATCGAAAGACCAGCATGATAAGATGGGTGGTGTTAATGGGTTGGGAACAGGCCCGAGATGTGATAGGGAGAATTCTTTGGGTTCGATTGACTGGAAGCCACTTAAGTGGACCCGATCTGGAAGCTTGTCTTCTCGAGGCTCAGGTTTTAGTCACTCAAGTAGCTCAAGGAGCATGGCAGGGGGAGATTCCTATGAAGCAAAGCCTGATTTGCAACCCAAAAATGTCACTGCTATTGAGTCGCATTCAGGAGAAGCCACTGCATGTGTGACATCTTCTATGCCTTCTGAAGATACGATGTCTAGGAAGAAGCCTAGACTAAATTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAAAAAGTTGATGTACCTGATCCAGGAGCAAACAAAGATGGCTCGGTCTCATCTGCTGGCAATATGGAACCTTGTAATATGACCAGTCCCAACATGGTAGAGAAAAGCCCAAAAGCTACAGGATTTTCGGATTGTGCATCTCCTGCAACTCCATCGTCTGTTGCCTGCAGTTCCTCACCAGGCGTGGATGATAAATTATTGGGAAAGACTGCAAATGCAGGCAATGATGTTAGTAATTTGACCGATTCACCAGCTCCTGGGTTCCAGAATCACCTGCAGAAGTTTTATCTCAACCTTGATAAATTGGATATGGACTCCTTGAATAATTTGGGCTCTTCAATTGCTGAGTTAGTACAGTCTGATGATCCAAGTTCCGAAGATTCTGGTCTTGTTAGGTCCAATGCAATTAATAAGTTGCTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATTGATTTGCTTGAAAATCAACAGAAGTCTCTAAAATCTGAATCTGTGGACGTATATCAGTGTCCAGTGGCATTGGGTTCAGAAGAACATGTTGAAGTATCTCAGAAGGTCATTCGGCCAGTACCGTTGGAAATCATTTCTTCTGATGAACCCAATGCAGATAAGATGCCACCTAATTTATGTAGTATTCATGAAAATGACAAGGAAGAGGATATTGATAGTCCTGGATCAGCAACTTCTAAACTTGTTGAGCCTCTGCCTTTGGTAAAAGCAGTTTCTTCATGTGATACTGGGGGATTTGGTATCTTATCAAGGGATGTGGGTACTATTCAATCTACTTCGATGAAATGCTTAGTCCGCTGTACTACTGGGAAAAATGTTAGTGTATCTGCTTGTAATGATGTCAATACACCGACAGAAGTAAAGGAAAGCATGGATGATGCTACCTACGGAGCAAACTTATGTTCTAGCTATGAGGATACTTATAACTCAATTATTGCTTCAAATAAAGAATATGCTAACAGAGCGCATGGAGTATTTGCTAAGTTAGTGCCAAAAGAATGTAAAAAGCTTGGTAATATGGGAGTCAGCAGTGATTTGTCCTCTCATACATTCATTATGGAAAAATTTGCTGAGAAAAAACGGTTTGAAAAATTTAAGGAGAGAGTTATTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCCTACTGTCTATAAAGAAATGCCGTCCAAAATCTCATAAAAAAAACGAACTAGGTGTGCGAACTACCTGTAGCAGTAATATGAAGAACCGATCTTCCATCCGTTCACGGTTTCCTTTCCCTGCTGGAAATCATCTAAGCTTGGTTCCAACCGCAGAGATCATTAACTTCACAAGCAAACTTCTTTCAGAATCCCAACCTCAAATTCAGAGGAACACCCTGAGGATGCCAGCATTAATATTGGATGAGAAGGAGAAGATGGTTACAAAGTTCATATCTAGTAATGGGCTGGTCGAAGATCCGTTGGCTATTGAGAAAGAAAGGGATATGATCAATCCGTGGACATCAGAAGAAAAAGAAATTTTCTTGGAGAAATTTGCTGCAATTGGAAAAGATTTCCGGAAAATTGCTTCTTTTCTTGATCACAAGACAACTGCGGACTGTGTTGAGTTTTACTACAAGAATCACAAATCTGAATGTTTTGAGAAACTGAAGAGGAAAGATGTTGGTAAGCTCGGGAAGTCATTTTCAGCTAAAACTAACTTGATGGCATCAGGTAATAAAAGGATGCGGTCAGGAAGAATCCTTTTGGGGGGATATGGTAATGCCAAAGCATCAAGAGCCGAGGACAGCAATATTGAAAGATCAAACAGTTTTGACATCCTTGGGGATGAAAGGGAAACTGCTGCTGCGGCTGATGTATTGGCTGGTATATGTGGTTCACTTTCATCTGAAGCTATGAGTTCCTGCATAACAAGTTCAATTGATCCTGTGGATGGTAACAAGGAAAGGAAGTTCTTGAGAGGGTACCCGCTATGCAAACAACCCTTGGTGCATGATATTTCTCAGAATGCTGAGGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAGTGGATGTTTCGGAGTGGACAGATGATGAGAAGGCAGCTTTTCTTCAGGGTGTATCATCTTTTGGTAAGGATTTCGCGAAAATAGCACGGTGTGTAGGTACAAGGTCCCGAGAACATTGCAAAGTTTTCTTCAGCAAGACTCGGAAAGTCCTTGGATTGGATCTCTCACACCCCATTCCTGGAATTGTCGAATCCGCGCTGAATGATGATGCAAATGGTGGTGAGAGTGACACCGATGATGCATGTGTTGTTGAGGCAGGTTCAGTGGTTGATGCTGACAAGTCTGGAAATAAAACAGACGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGACGAATCCAATCCTATGGAAGCTAGGAGCCCGTCAGCTGAATTTAATGAATCAAGAGAAATCAGTGAGACAGAAGTACGTCTTGAAAATTTAGACGTGGCTTCCAATGTTTGTGCAATTAAGGTTGAATCTAAGCTGGGATCTGATGGTAGTGGGGTTGACTTGGGCAAAACCGACAAGTCTGGTTCAGTCAATGAAGTTGGCTTGGGAGATGCAGTTAGAGAATCAATTTCTGCTTCAGGAGTAACTGAACCGCGGGAGTGTCGTTCTGTTGCTGTGGATAGACTAGATTATGAGGGTTCTTCTGGGGTTTTTGGAAATGGAGTGGATAGGCAAAGAGCGTCAGCACCCCAATGTGTTGATGACAGAGATGATAAACATGAAGCTGATGCAGGATTGAGTTTTGGTTCTGAAAATAAGCGCGTGTCCTTTGGAAAGCCTCATACCTCAGCATTATCTACAAACGATCCTCGGTCAACTGTAAATTCATTTTTTCTAAAAGCTTGTACTTCTCAGTGTGAAAAAACAGTTAACCAGGATAGGCTGTCCTCAACTTGTGATATTCAGGGAGGTAGAGATATGCGATGTCATAGCTCTGGTAGCAATGGTGACCATCAGCTTCCTCTTCCAGGGAGCCATGTCGAGACTGTCAGTGTCCTCCAGGGCTATCCAATGCAAGTGCCCATCAAGAAAGAAGTGGACGGGGATGTGAATTGCTGCAGTTCTGCGACTGATTTGCCTCTTCTGCCCCAAAAAATCAAACAGACTGATGATCATTCCAAAACATCATGGCATTCTTCAGATGCAGAAAAAACATCCGGAAATGGTGATGTGAAATTGAAACTGTTCGGAACGATACTAACGAATCCTTCTTCCACTCAGAAACCTAATTTGATTACAAAGCGAAGTGAAGAAAACGGTACCGGTCATCCAAAGTTAAGCAACAAGTCTTCTAATCTGAAATTTACTGGTCATCAAAATTCTGATGGAAATTCGAAAATTTTGAAGTTTGACCACAGTGATTATGCTGGCCTTGAAAATGTTCCAGTGATGAGTTATGCTTATTGGCAAGGAAATGGAATACAGAGTATACAGCCTGGTCTCTCGTCTTTGCCCGATTCTTCGTTCTTGTTAGCTAAATATCCTGCTGCCTTCAGTAATTATCCTATACCATCTTCCAATTTGGAGCATCAACCATTGCAACGGCATTTGACTGGTTCATCTAATTTTATAGCTAGAGACAACAATTGCAGCAATGCTATGCTTGATTATCAGATGTTTAGAAGTAGGGATGGTCCACAAGTGCAGCCATTTATAGTAGATGTCAAACACCGCCAAGATATATTCTCTGAGATGCAGAGAAGAAACAGTTTCGAAGCAATCTCTAGTTTGCAACAGCAGGGCAGAGGAATGATGGGAATGAATGGTGTTGGAAGACCTGGGATTCTAGTGGGAGCGTCGTGCAGTGGTGTCTCAGATCCCGTGGCAGCAATCAAAATGCATTATTCCAATTCTGACAACAAATATGGTGGTCAGAATGGGAGTATTGTAAGAGACGATGAATCTTGGGGAGGGAAGGGGGACTTAGGCAGGTAG 4848 0.4309 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSADFRRPPGHGKQGGWHMFSEEPGHGYGVSRSGDKMLEEDSRPSISRGDGRYGRSSRDNRGGPFGQRDWRGHSWEVTNGSPNLSRRPQDMNNDQRSVDDSLTYSSQPHSDFVNTWEQHQSKDQHDKMGGVNGLGTGPRCDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSMAGGDSYEAKPDLQPKNVTAIESHSGEATACVTSSMPSEDTMSRKKPRLNWGEGLAKYEKKKVDVPDPGANKDGSVSSAGNMEPCNMTSPNMVEKSPKATGFSDCASPATPSSVACSSSPGVDDKLLGKTANAGNDVSNLTDSPAPGFQNHLQKFYLNLDKLDMDSLNNLGSSIAELVQSDDPSSEDSGLVRSNAINKLLIWKADISKVLEMTESEIDLLENQQKSLKSESVDVYQCPVALGSEEHVEVSQKVIRPVPLEIISSDEPNADKMPPNLCSIHENDKEEDIDSPGSATSKLVEPLPLVKAVSSCDTGGFGILSRDVGTIQSTSMKCLVRCTTGKNVSVSACNDVNTPTEVKESMDDATYGANLCSSYEDTYNSIIASNKEYANRAHGVFAKLVPKECKKLGNMGVSSDLSSHTFIMEKFAEKKRFEKFKERVIALKFKALHHLWKEDMRLLSIKKCRPKSHKKNELGVRTTCSSNMKNRSSIRSRFPFPAGNHLSLVPTAEIINFTSKLLSESQPQIQRNTLRMPALILDEKEKMVTKFISSNGLVEDPLAIEKERDMINPWTSEEKEIFLEKFAAIGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKLKRKDVGKLGKSFSAKTNLMASGNKRMRSGRILLGGYGNAKASRAEDSNIERSNSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSIDPVDGNKERKFLRGYPLCKQPLVHDISQNAEDETCSDESCGEVDVSEWTDDEKAAFLQGVSSFGKDFAKIARCVGTRSREHCKVFFSKTRKVLGLDLSHPIPGIVESALNDDANGGESDTDDACVVEAGSVVDADKSGNKTDEDLPSDALNTFHDESNPMEARSPSAEFNESREISETEVRLENLDVASNVCAIKVESKLGSDGSGVDLGKTDKSGSVNEVGLGDAVRESISASGVTEPRECRSVAVDRLDYEGSSGVFGNGVDRQRASAPQCVDDRDDKHEADAGLSFGSENKRVSFGKPHTSALSTNDPRSTVNSFFLKACTSQCEKTVNQDRLSSTCDIQGGRDMRCHSSGSNGDHQLPLPGSHVETVSVLQGYPMQVPIKKEVDGDVNCCSSATDLPLLPQKIKQTDDHSKTSWHSSDAEKTSGNGDVKLKLFGTILTNPSSTQKPNLITKRSEENGTGHPKLSNKSSNLKFTGHQNSDGNSKILKFDHSDYAGLENVPVMSYAYWQGNGIQSIQPGLSSLPDSSFLLAKYPAAFSNYPIPSSNLEHQPLQRHLTGSSNFIARDNNCSNAMLDYQMFRSRDGPQVQPFIVDVKHRQDIFSEMQRRNSFEAISSLQQQGRGMMGMNGVGRPGILVGASCSGVSDPVAAIKMHYSNSDNKYGGQNGSIVRDDESWGGKGDLGR* 1616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 1377 1404 - -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 200 223 - -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 1595 1615 - -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 1083 1105 - -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 117 158 - -
Tpr1g0989 1615 Gene3D - 948 1028 - -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 76 109 - -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 1336 1350 - -
Tpr1g0989 1615 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1587 - -
Tpr1g0989 1615 SUPERFAMILY Homeodomain-like 975 1024 IPR009057 -
Tpr1g0989 1615 Gene3D - 765 837 - -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 8 45 - -
Tpr1g0989 1615 ProSiteProfiles SANT domain profile. 784 835 IPR017884 -
Tpr1g0989 1615 ProSiteProfiles SANT domain profile. 973 1024 IPR017884 -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 1335 1357 - -
Tpr1g0989 1615 CDD SANT 977 1016 IPR001005 -
Tpr1g0989 1615 SUPERFAMILY Homeodomain-like 772 833 IPR009057 -
Tpr1g0989 1615 SMART sant 974 1022 IPR001005 -
Tpr1g0989 1615 SMART sant 785 833 IPR001005 -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 1 268 - -
Tpr1g0989 1615 Pfam Myb-like DNA-binding domain 977 1017 IPR001005 -
Tpr1g0989 1615 Pfam Myb-like DNA-binding domain 788 829 IPR001005 -
Tpr1g0989 1615 Coils Coil 423 450 - -
Tpr1g0989 1615 MobiDBLite consensus disorder prediction 238 260 - -
Tpr1g0989 1615 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0989 Tpr-Chr1 8598005 8607708 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr1g0989 Myb_DNA-binding 1.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0989 - - cam:101504689 2586.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0989 1 8598005 8607708 Tpr1g0989 1 8598005 8607708 ECH