Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0950 ATGGACTGTCTCAACTTCGCATCTTCCGCACCTTCTCGCCGCTCTGGGATGCTGGGAAAACAGTTGAATTCCCCTCTTCTCACTATTGATTCTGCACCAAATTTCTTCCATTGCAAGGCTGATTTTGCTGCTGCATCTTCAAGTATTCAATCGTCAAATATCAGATATTCTTGCGGATTTTCACCAAGTGTCGCAAAAGAAAAATGGACCTCAAATCATTCTACGAACCATTGGATATTGCGTTCTACAACACAGATAGAAAATATAATCACGAGTAATGAAGATCGGAGTATGTGGGAAGCATGTAGACAAGCTCTTTCTGCATTTAACTTCAGTGATGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGACTTGTCCATTCTCCTTATTGGGGAGAAGATCGTAAGAAAGAAGTTCCCAAATTCGAGACAGTAAATGGTATATTAGAATATCTAAGGAGTTTAAATCTTTCTGATGATGATCTTTCCAAGTTGCTCAAAAAATTTCCCGAAGTTCTTGGGTGTAATCTAGAAGAAGAGTTGAAAGGGAATATAAAGATCTTGGAGGAGCAGTGGAGTATTGAAGGAAAATCACTTAGAAACCTTCTCCTTCGAAATCCGAAAGTTTTGGGTTATAATGTTGATTGTAAAGGAGATTGTATGGCACAATGCACTAGATGCTGGGTTCGATTCTAG 699 0.3891 MDCLNFASSAPSRRSGMLGKQLNSPLLTIDSAPNFFHCKADFAAASSSIQSSNIRYSCGFSPSVAKEKWTSNHSTNHWILRSTTQIENIITSNEDRSMWEACRQALSAFNFSDEEKDKILGKAFGLVHSPYWGEDRKKEVPKFETVNGILEYLRSLNLSDDDLSKLLKKFPEVLGCNLEEELKGNIKILEEQWSIEGKSLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0950 232 PANTHER CGI-12 PROTEIN-RELATED 15 231 IPR003690 GO:0003690|GO:0006355
Tpr1g0950 232 Pfam mTERF 150 214 IPR003690 GO:0003690|GO:0006355
Tpr1g0950 232 Gene3D Transcription termination factor 3, mitochondrial 67 228 IPR038538 -
Tpr1g0950 232 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 231 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr1g0950 mTERF 2.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0950 - - gmx:100797265 363.614