Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0942 ATGCCAACATCAACAACAACGTTTGGTGGTGTAGAAACTTCAAATGCAGACTCATCATCCAAACACACCCCCCAAGAATCTCGTGACCCTCCTCCTTTACTCTCTTCTTCTTACCCAATCACTCTTAAGTTTATGGACGTGGGATACCGATTGAAGATAGAGAACAAAAAAGGAAACGGAGGGTGCATCAAGAATTTCTTTACACCATCATCATCATCACCGTCTGATCAAAGATCAACGCAAGAGCGAATCATACTTAACGGAGTAACGGGAATAGCTTACCCAGGAGAGATCCTAGCCATTCTAGGTCCATCAGGAAGCGGAAAATCAACGCTCCTAAACTCACTAGCAGGAAGACTTCATGGAAACGGACTCACCGGAACAATTCTCGCTAACTCATCAAAACTTAACAGAACGGTTCTCCGTCGAACCGGATTCGTTACACAAGATGATATTCTCTACCCTCATTTAACCGTCCGCGAGACGCTGATTTTCTGCTCCATGCTTCGTCTCCCGAGAAAACTTTCTCGGGAAACGAAAGTATCAGCGGCAGAATCAGCTATCGCGGAACTTGGTTTAACAAAGTGTGAGAACACTATAATTGGCAACAGTTTCATTCGCGGTGTTTCTGGTGGAGAGAGGAAGAGAGTGAGTATAGCTCATGAGATGTTAGTAGACCCGGCGTTATTGATCTTAGATGAGCCTACATCTGGATTGGATTCAACGGCGGCGCATCGGCTTGTTTCGACGCTGGGATCGTTGGCGAGGAAAGGGAAGACGGTGGTTACGTCGGTGCATCAGCCATCGAGTCGTGTATACCAAATGTTTGATAAAGTGATTGTGTTATCAGAAGGTCAGTGTATGTACTACGGGAAAGGAACCGACGCTATGAGATATTTTGAGTCGGTTGGATTCGCGCCATCATTTCCGGTAAATCCGGCGGATTTTCTGCTTGATCTTGCTAACGGTGTTTGCCATGCAGATGGTGTAAGTGAGAAAGATAGACCAAACATAAAGCAAAATCTAATTCATTCATACAACACAGTATTGGGTCCAAAGGTGAAAGCACTTTGCATGGACACAGCTAATGTTTCAACAAGAGACTCTAAGTCTAACCCTTTAAGAAACAACTCTTCAAAAGAACATAGATCATATAATAACAGATTCAGTATCTTTGATTGGTTTTACCAATTCAATATTCTGCTCCAAAGAAGCCTCAAAGAAAGAAAATATGAATCATTCAACACACTAAGAGTTTTTCAAGTTGTTGCTGCTGCATTACTAGCTGGTTTAATGTGGTGGCATTCAGATTATAAGAACATTCAAGATAGACTTGGATTACTCTTCTTCATTTCAATCTTTTGGGGTGTATTCCCATCTTTCAACTCTGTTTTCGCATTCCCTCAAGAACGCGCGATCTTTGTTAAAGAAAGAGCTTCTGGTATGTACACATTATCATCCTATTTCATGGCTAGAATTGTTGGTGACTTACCAATGGAGCTTCTTCTTCCAACAGTTTTCCTTATCATTACTTATTGGATGGGAGGATTAAAGCCTGATTTGTTATCATTTCTCTTGACTTTGTTGGTTGTTCTCGGATTCGTGCTTGTGTCGCAGGGTCTTGGACTTGCTTTAGGTGCTGCAATTATGGATGCTAAACAAGCTTCCACTGTTGCAGCAGTGACAATGCTAGCATTTGTTTTAACAGGTGGATATTATGTCCATAAGGTACCATCTTGTGTTGCTTGGATCAAATATATATCCACAACATTCTATAGTTACCGGCTTTTGACTAGAATTCAATATGGCGACGGCAAGAAAATAGCAAATCTATTAGGCTGCAATCATGAAGGTATTACTATTGATGGAGCTAGTTGCAAATTTCTTGATGAAGATGTGGTGGGTCAAATTGGTGCAATGGGATGCATTGGAGTGTTGTTTTTCATGTTTGTGTTTTACAGATTAGTGGCTTACCTTTGTTTGAGGCGCATCAAGAGTTGA 2001 0.4158 MPTSTTTFGGVETSNADSSSKHTPQESRDPPPLLSSSYPITLKFMDVGYRLKIENKKGNGGCIKNFFTPSSSSPSDQRSTQERIILNGVTGIAYPGEILAILGPSGSGKSTLLNSLAGRLHGNGLTGTILANSSKLNRTVLRRTGFVTQDDILYPHLTVRETLIFCSMLRLPRKLSRETKVSAAESAIAELGLTKCENTIIGNSFIRGVSGGERKRVSIAHEMLVDPALLILDEPTSGLDSTAAHRLVSTLGSLARKGKTVVTSVHQPSSRVYQMFDKVIVLSEGQCMYYGKGTDAMRYFESVGFAPSFPVNPADFLLDLANGVCHADGVSEKDRPNIKQNLIHSYNTVLGPKVKALCMDTANVSTRDSKSNPLRNNSSKEHRSYNNRFSIFDWFYQFNILLQRSLKERKYESFNTLRVFQVVAAALLAGLMWWHSDYKNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELLLPTVFLIITYWMGGLKPDLLSFLLTLLVVLGFVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCVAWIKYISTTFYSYRLLTRIQYGDGKKIANLLGCNHEGITIDGASCKFLDEDVVGQIGAMGCIGVLFFMFVFYRLVAYLCLRRIKS* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0942 666 MobiDBLite consensus disorder prediction 1 35 - -
Tpr1g0942 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 302 IPR027417 -
Tpr1g0942 666 Pfam ABC transporter 87 237 IPR003439 GO:0005524
Tpr1g0942 666 Pfam ABC-2 type transporter 266 386 IPR043926 GO:0140359
Tpr1g0942 666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 664 - -
Tpr1g0942 666 Pfam ABC-2 type transporter 396 601 IPR013525 GO:0016020|GO:0140359
Tpr1g0942 666 Gene3D - 77 303 IPR027417 -
Tpr1g0942 666 MobiDBLite consensus disorder prediction 1 34 - -
Tpr1g0942 666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 13 664 - -
Tpr1g0942 666 SMART AAA_5 95 286 IPR003593 -
Tpr1g0942 666 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 309 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0942 Tpr-Chr1 8107402 8115097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0942 74 291 Calmodulin-binding Proteins AT2G36910 27.935 3.31e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0942 K05681 - gmx:100812367 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0942 1 8107402 8115097 Tpr1g0942 1 8107402 8115097 ECH