Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0934 ATGGAGCCTCTTTCTTCCACCAAACAAAATAATCATAATAATCTTACTAAACCTTCTTCTCTCCATGTTGAAACTCCACCACTTGATGAACCCAGTCCTCTCCGTAAAATCATGGTGGTTGCTTCCATCGCCGCCGGTGTTCAATTCGGTTGGGCACTTCAACTTTCTCTTTTAACTCCTTACGTTCAGTTACTCGGTATCTCTCATACTTGGGCCCCTTACATTTGGCTTTGCGGCCCAATTTCCGGTATGCTTGTCCAACCGATTGTCGGTTATCACAGCGACCGTTGCACTTCACGCTTCGGTCGTCGTCGTCCATTCATCGCTGCCGGTTCATTTGCCGTCGCGATCGCCGTTTTCTTAATCGGTTACGCCGCCGATCTCGGACACATGTTCGGCGATAATCTAGAAAAAAAAGTCCGTCCACGTGCAATCGGAGTCTTCGTCGTCGGATTCTGGATCCTCGACGTTGCTAACAATATGCTTCAAGGTCCTTGCCGTGCACTTCTCGGCGATCTCTGCGCCGGTAACCAACGCAAAACGAGAAACGCAAACGCGTTTTTCTCGTTTTTTATGGCCGTCGGTAATATTCTCGGTTACGCCGCCGGTTCATACAGTAAACTTTATCACATGTTTCCGTTCACTAAAACTAAAGCATGTAATGTTTACTGTGCAAATCTAAAAAGCTGTTTCTTCCTCTCAATCGCTTTGTTAACCTTTTTAGCCACCGCAGCTTTGATTTACGTGAAAGAAAAAGCAATCACGACGGAGAAAACGGTTACAGATGAAGTAGACGGTGGTGGTGGTGGTAATAGTATGCCATGTTTTGGGGAATTATCCGGTGCTTTTCGTGAACTAAAGAGACCTATGTGGATTTTATTATTAGTGACGTGTCTTAATTGGATTGCTTGGTTTCCTTTTTTGTTGTTTGATACTGATTGGATGGGGAAAGAAGTTTATGGAGGAACGGTTGGGGAAGGTAAAGCGTATGATAAGGGTGTACGTACGGGTGCATTAGGACTTATGTTAAACTCAGTCGTTTTGGGTGTGACTTCATTGGGAGTTGATGTGTTGGCGCGTGGAGTTGGGGGCGTGAAGAGGTTATGGGGAATAGTTAATTTTGTGCTTGCGATTTGTTTGGGTATGACGGTTTTGGTTACTAAATTGGCTCAACATTCACGACACTATGTTGATGGTAGTATTGATCCTCTTCCACCTTCCGCCGGTGTTCAGGCCGGCGCGTTGGCTCTCTTTTCCGTTCTCGGAATTCCTCTTGCGATTACTTACAGCGTACCCTTTGCTCTAGCATCTATATTCTCAGCAACCTCAGGAGCAGGCCAAGGGCTATCACTAGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGATTGTCTCTGTTCTGGGTGGACCATGGGATGCTCTATTTGGAGGAGGTAACCTGCCAGCTTTTGTGGTGGGTGCCATCGCAGCTCTAGCAAGTGGCATACTATCCATAATCTTACTGCCATCTCCACCACCAGATTTGGCCAAGTCGGTAGGCACTTCCGGAGGAGGCTTTCATTAA 1566 0.463 MEPLSSTKQNNHNNLTKPSSLHVETPPLDEPSPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGISHTWAPYIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGSFAVAIAVFLIGYAADLGHMFGDNLEKKVRPRAIGVFVVGFWILDVANNMLQGPCRALLGDLCAGNQRKTRNANAFFSFFMAVGNILGYAAGSYSKLYHMFPFTKTKACNVYCANLKSCFFLSIALLTFLATAALIYVKEKAITTEKTVTDEVDGGGGGNSMPCFGELSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGKAYDKGVRTGALGLMLNSVVLGVTSLGVDVLARGVGGVKRLWGIVNFVLAICLGMTVLVTKLAQHSRHYVDGSIDPLPPSAGVQAGALALFSVLGIPLAITYSVPFALASIFSATSGAGQGLSLGVLNLAIVIPQMIVSVLGGPWDALFGGGNLPAFVVGAIAALASGILSIILLPSPPPDLAKSVGTSGGGFH* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0934 521 SUPERFAMILY MFS general substrate transporter 35 506 IPR036259 -
Tpr1g0934 521 MobiDBLite consensus disorder prediction 1 25 - -
Tpr1g0934 521 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 19 512 - -
Tpr1g0934 521 TIGRFAM GPH_sucrose: sucrose/H+ symporter 33 507 IPR005989 GO:0005887|GO:0008515|GO:0015770
Tpr1g0934 521 MobiDBLite consensus disorder prediction 1 21 - -
Tpr1g0934 521 CDD MFS_SLC45_SUC 37 497 - -
Tpr1g0934 521 PANTHER SUGAR TRANSPORTER 19 512 - -
Tpr1g0934 521 Gene3D MFS general substrate transporter like domains 31 512 IPR036259 -
Tpr1g0934 521 Pfam MFS/sugar transport protein 45 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0934 Tpr-Chr1 8021438 8025156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0934 19 521 Sucrose Transporter Gene Family AT1G22710 67.387 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0934 K15378 - gmx:547679 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0934 1 8021438 8025156 Tpr1g0934 1 8021438 8025156 ECH
Tpr2g5888 2 70602178 70604046 Tpr1g0934 1 8021438 8025156 PCT