Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0910 ATGGGTGCTGTCTCGGAATCTGCTTCTGCCGATGCTTTCAGTGAAGTGATGTCATCCATGCCTGGTTTTCGCTTTCATCCTACTGATGAGGAGTTGGTGATGTACTATCTGAAAAGGAAGATTTGTGGGAAGAAGTTGAAGTTCAACGTTATTTGTGAAACCGATGTCTACAAATGGGATCCTGAGGATTTGCCTGATCAATCTTTCCTAAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCACAGAGATAGGAAGTATCCTAATGGTGGAAGGTCTAACCGAGCAACTAGACATGGATACTGGAAAGCAACAGGAAAAGATAGAAATGTGATATTTAATTCTCGGTCAGTTGGAGTTAAAAAGACACTGGTTTTCTATTTCGGCAGAGCTCCTAGTGGTGAACGAACTGACTGGGTTATGCATGAATACACCATGGATGAAGAAGAGCTTAAGAGATGCCATGATGTTAAGGAATATTATGCACTTTACAAGGTGTTCAAGAAAAGTGGTCCTGGTCCTAAGAATGGCGAACAATATGGTGCACCATTTAAAGAAGAAGACTGGGCAGATGACAATGTTGTAGATTTTAATGTTAAAGCAGCTCAGCTGGAGGCTCCAAAGGCTGTTCTTAACCCTTTTACTGATCAGCCACAGCAGTTGGCTGTTGTTAATCCTTTTACCGATCAGCAGCAGCCTATGTTTGGTGATGAAATGGACGAATTCTTTAACGGGGCTTTTGATATTGAGCCTGTCCTTGATCAGCAACAGTTTAATGGTTATGCCGACTTTCCTCAGGTGTGTGATCTTCAACAAAGTGTGGTCATGGGTCAATTCTCCGAGGCCATGATATTCCCTGAGGCAAGTGGGAAATTGCAATCTAGCGGTCAGCATTATGATGCACAGTTCGTCTTTGACTTCAATCACTCGGCTACTTCTCACTTATCTGAAGCACCCGAGGTCACTTCTGCTCCCAACATTCAAAGTGACGAGGGGCCCGTCTTTTACGAGGACGGCTTCTTGGAAATTAACGACCTAATTGAGTTTGAAGATGGGTTGAGTGAATTTGAACTCTACCAAGATGCAGAGATGTTCCTTGGTACAGCAGAAGCCAATCAAAATGTTGATGAATTCTGGATGCATATTGAAAGGAACACAAGGAGTCAAACAGAAGACTACACTGGTTCTTTCTCTCAAACAAATCCAGGTGTTGTGTGTGACTCTGTCAGCTTTCCTACTGAAAGCACTGAAAATCAAAGAAGCACTGTGGAAGATGTTACTACAACTACAAGTAGATTCTCCTCTGCTCTCTGGGCCTTCGTTGATTCAATACCTACCACTCCGGCATCAGCAGCCGAAAATCCTTTGGTGAATCGGGCTTTGAATAGAATGTCTAGCTTCAGCAGGGTGAAGATCAATCCCACAAACATTGCTGCAGGTATTGAAACTACAACTATGAAGAGACCAGGCAGAAAGGGATTCTCATTCCTTTTCTTCCCAATTCTTATTGCTTTATGTGCTTTCTTGTGGATTTCTATTGGAAATTTGAGACTATTAGGGAGATGCATCTCCCCTTGA 1578 0.4271 MGAVSESASADAFSEVMSSMPGFRFHPTDEELVMYYLKRKICGKKLKFNVICETDVYKWDPEDLPDQSFLKTGDRQWFFFCHRDRKYPNGGRSNRATRHGYWKATGKDRNVIFNSRSVGVKKTLVFYFGRAPSGERTDWVMHEYTMDEEELKRCHDVKEYYALYKVFKKSGPGPKNGEQYGAPFKEEDWADDNVVDFNVKAAQLEAPKAVLNPFTDQPQQLAVVNPFTDQQQPMFGDEMDEFFNGAFDIEPVLDQQQFNGYADFPQVCDLQQSVVMGQFSEAMIFPEASGKLQSSGQHYDAQFVFDFNHSATSHLSEAPEVTSAPNIQSDEGPVFYEDGFLEINDLIEFEDGLSEFELYQDAEMFLGTAEANQNVDEFWMHIERNTRSQTEDYTGSFSQTNPGVVCDSVSFPTESTENQRSTVEDVTTTTSRFSSALWAFVDSIPTTPASAAENPLVNRALNRMSSFSRVKINPTNIAAGIETTTMKRPGRKGFSFLFFPILIALCAFLWISIGNLRLLGRCISP* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0910 525 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 15 316 - -
Tpr1g0910 525 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 369 524 - -
Tpr1g0910 525 PANTHER NAC TRANSCRIPTION FACTORS 2 15 316 - -
Tpr1g0910 525 PANTHER NAC TRANSCRIPTION FACTORS 2 369 524 - -
Tpr1g0910 525 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Tpr1g0910 525 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Tpr1g0910 525 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Tpr1g0910 525 SUPERFAMILY NAC domain 14 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0910 Tpr-Chr1 7749272 7752614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0910 19 523 NAC Transcription Factor Family AT1G34190 42.179 1.08e-131 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr1g0910 NAM 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0910 - - mtr:MTR_1g097300 808.52