Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0897 ATGGCAATGCATTCTCACATTGACAGAATTCTTTGGACCGAAGACCAAATCTCTCTTCGAATCTCTCAACTCGCCGCTCAAATCGTTCAAGACTTTCCTCCCGCTCCTTCACCTCCTCCCGTTTTTGTCGGCGTTCTCACCGGTGCATTCATTTTCATCGCTGACCTAGTTCGTAAAATTAACCTCCCCATTGATATTCATTTTCTCACTTCTAAATCCTATGGATCCGGAACTCTATCCAATTGCGCTCCCACCATTTCTCATCACTTCAATGTTGACGTTAATGGCCGCCACGTCATATTGGTTGAAGACATTGTAGACACGGGACATACTTTACATAAACTCATTGCACACTTGAAATCAAAAGGAGCATCCTCTGTGTCCGTATGCACACTACTTGACAAACCAGCAAGGAGGAAAGTTGATGTACAGCTGGTGGGTGAAGGAAAATTCTACCGGGGATTTGAGTGTCCAGACAGTTTTGTTGTTGGTTATGGAATGGATTTTGACGAATTATACAGAAATCTACCTTATATTGGTGTCTTGAAACCTGAACATTACAGTTGA 567 0.4286 MAMHSHIDRILWTEDQISLRISQLAAQIVQDFPPAPSPPPVFVGVLTGAFIFIADLVRKINLPIDIHFLTSKSYGSGTLSNCAPTISHHFNVDVNGRHVILVEDIVDTGHTLHKLIAHLKSKGASSVSVCTLLDKPARRKVDVQLVGEGKFYRGFECPDSFVVGYGMDFDELYRNLPYIGVLKPEHYS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0897 188 SUPERFAMILY PRTase-like 3 187 IPR029057 -
Tpr1g0897 188 PANTHER HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE 3 187 - -
Tpr1g0897 188 Pfam Phosphoribosyl transferase domain 19 169 IPR000836 -
Tpr1g0897 188 Gene3D - 1 188 IPR029057 -
Tpr1g0897 188 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 3 187 - -
Tpr1g0897 188 CDD PRTases_typeI 21 140 IPR000836 -
Tpr1g0897 188 TIGRFAM HGPRTase: hypoxanthine phosphoribosyltransferase 10 183 IPR005904 GO:0004422|GO:0006166
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0897 1 187 PRT Gene Family AT1G71750 57.360 4.56e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0897 K00760 - gmx:100037484 274.633