Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0870 ATGGAAGAACTCTCCCGTGCTACAGATAACTTCTCCCCGCTCCGCATCGTCGGTGATGGAAGTTTCGGTATGGTTTACAAAGCTCAACTCTCCACCGGCGTCTTCGTCGCCGTGAAAAAACTCTCCCCCGACGCCTTCCAAGGATTTCGCGAATTCGCGGCGGAGATGGAGACACTAAGCAAGCTTTTCCACCGTAACATCGTTAAAATCCTCGGTTATTGGGCTTCTGGACCTGAACGGTTACTCGTTTACGAGTATATCGAAAAAGGAAACCTCGATCAATGGCTTCACGAACCTTCTTCTCCGACGCAACCAAACGACGACGTTTTGTCCACTGATATTATTCGTTCTCCTTTGTCTTGGGAAACAAGAGTCAACATAATTCGTGGTGTTGCTCATGGGCTTTGTTATTTACATGGGCTTCAGAAGCCCATTATTCATAGAGATATCAAAGCTAGCAATGTCTTATTGGACTCTGAATTTCAGGCCCATATTGCTGATTTTGGGCTCGCACGTAGGATGGATAAATCGCATTCGCATGTGTCAACGCAGGTCGCGGGTACTATCGGTTACATGCCACCGGAGTATCGAGATGGGTCTAATGTAGCAAACCAGAAAGTTGATGTTTATAGTTTTGGAGTCTTGATGATCGAAACTGTATCGGGCCATAGGCCCAATTTGGCTGTGAAATTGGAGGGAAATGATATTGGGCTTGTTAATTGGGCCAGGAAGATGAAGGAAAGGAACACTGAGATGGAGATGCTAGATGTAAATATTCCAAGAGAAGGGTTGAAGGAGGAGAGTGTTAGGGAGTATGTACACATTGCTTGTATGTGCACTGGTGAGTTACAGAAAGATAGGCCTGAAATGCCAGAGGTTGTCAAATTATTGGACTCAATGCCCCTATGA 909 0.4576 MEELSRATDNFSPLRIVGDGSFGMVYKAQLSTGVFVAVKKLSPDAFQGFREFAAEMETLSKLFHRNIVKILGYWASGPERLLVYEYIEKGNLDQWLHEPSSPTQPNDDVLSTDIIRSPLSWETRVNIIRGVAHGLCYLHGLQKPIIHRDIKASNVLLDSEFQAHIADFGLARRMDKSHSHVSTQVAGTIGYMPPEYRDGSNVANQKVDVYSFGVLMIETVSGHRPNLAVKLEGNDIGLVNWARKMKERNTEMEMLDVNIPREGLKEESVREYVHIACMCTGELQKDRPEMPEVVKLLDSMPL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0870 302 Gene3D Transferase(Phosphotransferase) domain 1 87 301 - -
Tpr1g0870 302 ProSiteProfiles Protein kinase domain profile. 11 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0870 302 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Tpr1g0870 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Tpr1g0870 302 SUPERFAMILY Protein kinase-like (PK-like) 3 297 IPR011009 -
Tpr1g0870 302 SMART serkin_6 11 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0870 302 Pfam Protein tyrosine and serine/threonine kinase 15 297 IPR001245 GO:0004672|GO:0006468
Tpr1g0870 302 PANTHER OS01G0253100 PROTEIN 1 299 IPR045271 GO:0004714|GO:0006468
Tpr1g0870 302 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 299 - -
Tpr1g0870 302 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0870 Tpr-Chr1 7394692 7395600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0870 1 297 Receptor kinase-like Gene Family AT5G07280 43.960 2.42e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tpr1g0870 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0870 - - lja:Lj5g3v1927340.1 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0870 1 7394692 7395600 Tpr1g0870 1 7394692 7395600 ECH