Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0848 ATGGATATGAATTTGTCACAAGGTGGTGTTGGCAATTCTTTTGGTGGATTTGATTTACCTGGATCAATTCAGGTTCATCATCAAGCACACCATCCTCATACTATTCACCAACATCAATCTCATCCTCATCCGCGTCAAGGGTCTTCGCTACATTCATCGGTTCATGACGGTTTTCCACTCACAATGGGAACTTTGCAGAACTGTGATCAAACTATTTCAATGACAGATTATAGTAAGGGAGAGAGAAGCAAAAACTCGACGAGTGATGATGATGAGCCGAGTTTTAATGAGGATGTTTTTGATGGTCAACATGAAGGGGGTAGAGGTAAAAAGGGATCATCGTCGCCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAGGCTTATGATAACAGCTGTTTCTTATATAGGTGAGGATATAACTATTGACGGTGGAGGTGGAAATGGAAGAAGGAGATTTGCGGTTTTGCAGAAAAAGGGTAAGTGGAAATCTGTATCGAAAGTCATGGCTGAAAGAGGTTATCATGTTTCACCTCAACAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAGAAGCTTAATGATATGCTAGGGAGAGGGACTTCTTGTCAAGTTGTTGAAAATCCTTCACTTTTGGATGTAATAGATTATCTTTCCGAGAAAGAAAAAGATGATGTTCGAAAAATATTAAGCTCGAAACACTTGTTTTATGAAGAGATGTGTTCTTATCATAATGGTAATAGGTTGCATTTGCCACATGATCCTGCACTGCAATGTTCGATGCAATTAGCTCTCCGAAATAGGGACGATCATGATAATGATGATATCAAAAGGTCACATCTTGGCGATCACGACGAAGATGAACAAGATGCAGAAATTGATGAACATGATGATTTTAGAGATAATTGTGCTTCCCGTGGTGATAGCAAGGGACTATTTGGGCGGTTAGGTGGATCTACTAAGAAATTGAAACAAAACCAATGCCAAGAAGATGCTAATGTTTCTGGTCATTCTTTAAATTGTCAAGATAATTTCAACAAAGGTTCGTATCCCCGCGAACAATCGGTCCATTCTGATGGTAATAGAGTTATACCAGAAAACATGAGAGCAGCATGGTTACAGAAGCAATGGGTTGACTCTCGCCAAGCTCAGTTAGAAGAGCAAAAGCTGCAAATTCAGGTTGAGAAGTTGGAATTAGAGAAACAAAGATTAAAGTGGCAGAGGTTTAGTAAGAAAAAGGACCAAGAGTTGGAGAAGCTGAGTCTAGAAAACGAAAGAATGAAGCTTGAAAATGAACGTATGGCTTTAGAACTGAAGCGAAAGGAAATGAGTATTGGCCTTAACTAG 1356 0.3931 MDMNLSQGGVGNSFGGFDLPGSIQVHHQAHHPHTIHQHQSHPHPRQGSSLHSSVHDGFPLTMGTLQNCDQTISMTDYSKGERSKNSTSDDDEPSFNEDVFDGQHEGGRGKKGSSSPWQRVKWTDKMVRLMITAVSYIGEDITIDGGGGNGRRRFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQCSMQLALRNRDDHDNDDIKRSHLGDHDEDEQDAEIDEHDDFRDNCASRGDSKGLFGRLGGSTKKLKQNQCQEDANVSGHSLNCQDNFNKGSYPREQSVHSDGNRVIPENMRAAWLQKQWVDSRQAQLEEQKLQIQVEKLELEKQRLKWQRFSKKKDQELEKLSLENERMKLENERMALELKRKEMSIGLN* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0848 451 MobiDBLite consensus disorder prediction 26 52 - -
Tpr1g0848 451 Coils Coil 413 447 - -
Tpr1g0848 451 Gene3D - 122 195 - -
Tpr1g0848 451 Pfam Myb/SANT-like DNA-binding domain 119 246 IPR044822 -
Tpr1g0848 451 PANTHER FACTOR, PUTATIVE-RELATED 1 451 - -
Tpr1g0848 451 MobiDBLite consensus disorder prediction 281 304 - -
Tpr1g0848 451 PANTHER F16F4.11 PROTEIN-RELATED 1 451 - -
Tpr1g0848 451 Coils Coil 383 410 - -
Tpr1g0848 451 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0848 Tpr-Chr1 7160265 7163335 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr1g0848 Myb_DNA-bind_4 2.5e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0848 - - gmx:100816474 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0848 1 7160265 7163335 Tpr1g0848 1 7160265 7163335 ECH
Tpr2g0788 2 9532579 9534888 Tpr1g0848 1 7160265 7163335 PCT