Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0841 ATGTGGCTTTGGCTTTTATCTTTTTCAACTTTTGTGGTTCAAATTCTACAGAAGCTGAAACATTATTCTATATGTGTAGTTAGAAACACTACTCCAAATAGAGTCCTTTTGGGCTCCAAACATCACAGAACGCTGAAACACTACTCCACAAAACAGGATATGATGGAGACTCTAGAAGGAAACAACATGACTATGATTCATGATGCCATAGTTTTAAAAGAAGAAGCAATAGTGCATGAAAATATTCATGAACAAAACAATATTACTAGTCTTACAAACCTCGCCATCACGCAGTGCATTGGCGAAACAGATACCAATTTGGATGCAATAATTACTCGTTATGCGGATACTATAAGTAATTACAACTTGCGTAACTTAGGTTACCCTACAAATCAAAACTTCAATTATAATGCGTTTGCACCATTGCTTAATTTTCATTTGAACAATGCTGGAGATCCATTTCTTGGAAGCAGTTTCTCTCTAAATTCAATGACATTTGAAGTTAGTGTGCTTGATTGGTTTGCTAAACTATGGGAGATAGAAAAGAATGATTATTGGGGATACGTCACAACTGGTGGAACTGAAGGCAATCTTCATGGAATTTTAGTAGGGAGAGAAAATTTTCCAGGTGGAATTCTATATACTTCAGAAGATTCACATTATTCAATACCGAAAATAGCAAGAATGTATCGAATGCAATGTGTGAAGGTTGGTTCTTTGATCTCTGGTGAAATTGATTGTGTTGATCTAGAGGCTTCTCTACTTGCCAACAAGGACAAACCAGCAATCATCAATCTAAACATAGGGACGACTTTGAAAGGAGCTATTGATGATATTGATCTTGTAATACAAACACTTTACAAATGTGGATTTACTCGTGATCGATTCTACATTCATTGTGACGGTGCTCTATTTGGTATCATGTTGCCTTTTATCGAACAAGCTCCAAGGATTAGCTTCAAGAAACCTATCGACAGTGTAACTATTTCGGGTCATAAGTTTTTGGGATGTCCTTCGCCTTGTGGTGTTTTGATAACTCGTTTGAAATACATTGATGCCCTCTCGAGCGAATGTGGCATCATTGCTTCAAGGGATGCTACAATCACAGGCAGCCGAAGCGGGCATTCTCCAATATTTCTTTGGTATGCTCTCACAAAAAGGGGTTTAATAGGACTTGAAAATGAAGTGCATAATTGCTTAATGAAATCACGTTACTTATTAAATCTACTACGTGATGCTGGAATTGGTGCAATGTTAAATGAATTTAGCAACGTAGTTGCATTTGAGAAGCCCCAAGATGATCAATTTACCCGTAGATGGAATTTGGCAAGCAATGAAAATATTGCACATGTGGTAGTATTGCAACATGTTACTATTGAAATGCTTGACAACTTTGTTGGTGAATTTGTCCAAAAACGATTGATTTGCTCTAAAGATGGACAAAAGTTTCAACCTCTATGCATTGCAAACGATGTTGGTTCTAGGAATTGTGCTTGTTCGATGCATAACGTTTTGAGAAATATTTATTAG 1530 0.3667 MWLWLLSFSTFVVQILQKLKHYSICVVRNTTPNRVLLGSKHHRTLKHYSTKQDMMETLEGNNMTMIHDAIVLKEEAIVHENIHEQNNITSLTNLAITQCIGETDTNLDAIITRYADTISNYNLRNLGYPTNQNFNYNAFAPLLNFHLNNAGDPFLGSSFSLNSMTFEVSVLDWFAKLWEIEKNDYWGYVTTGGTEGNLHGILVGRENFPGGILYTSEDSHYSIPKIARMYRMQCVKVGSLISGEIDCVDLEASLLANKDKPAIINLNIGTTLKGAIDDIDLVIQTLYKCGFTRDRFYIHCDGALFGIMLPFIEQAPRISFKKPIDSVTISGHKFLGCPSPCGVLITRLKYIDALSSECGIIASRDATITGSRSGHSPIFLWYALTKRGLIGLENEVHNCLMKSRYLLNLLRDAGIGAMLNEFSNVVAFEKPQDDQFTRRWNLASNENIAHVVVLQHVTIEMLDNFVGEFVQKRLICSKDGQKFQPLCIANDVGSRNCACSMHNVLRNIY* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0841 509 Gene3D Aspartate Aminotransferase, domain 1 385 473 IPR015422 GO:0003824
Tpr1g0841 509 Pfam Pyridoxal-dependent decarboxylase conserved domain 165 415 IPR002129 GO:0016830|GO:0019752|GO:0030170
Tpr1g0841 509 PANTHER SERINE DECARBOXYLASE 80 502 - -
Tpr1g0841 509 PANTHER - 80 502 - -
Tpr1g0841 509 Gene3D - 143 384 IPR015421 GO:0003824
Tpr1g0841 509 SUPERFAMILY PLP-dependent transferases 108 470 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0841 Tpr-Chr1 7106025 7111540 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0841 268 399 Calmodulin-binding Proteins AT2G02000 27.660 3.52e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0841 K25193 - gmx:100781665 647.891