Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0839 ATGCCGAGTCTACAAGGAATCAACATGGCAATGACATTGATTCATGATGCAAGAGAAGAGAAACATGAAAACATTCAAGAAGAGAACATTAATAGTCTTACCAATCTTGCTATCACGCAATGCATTGGCGAAACAGATGCCAATTTGAATGCACTAATTACTCGCTATGTGGATACTATAACCAAGAACAACTTACGTAACTTAGGTTACCCCACGAATCAAGACTTCAATTATGACGCATTGGCACCATTGATTCATTTTCATTTGAACAATGCTGGAGATCCATTTCTTGGAAGCAGTTTCTCTCTAAATTCAATGACATTTGAAGTTAGTGTGCTTGATTGGTTTGCTAAACTATGGGAGATAGAGAAGAATGAGTATTGGGGATATGTCACATCTGGTGGAACTGAAGGCAATCTTCATGGAATTTTAGTAGGGAGAGAAAAATTTCCAGATGGAATTCTATATACTTCAGAAGATTCACATTATTCAATACCGAAAATAGCAAGAATGTATCGAATGCAATGTGTGAAGGTTGGTTCTTTGATCTCTGGTGAAATTGATTGTGTTGATCTAGAGACTTCTCTACTTGCCAACAAGGACAAACCAGCCATCATCAATCTAAACATAGGGACGACTTTGAAAGGAGCTATTGATGATATTGATCTTGTAATACAAACACTTTACAAATGTGGATTTACTCGTGATCGATTCTACATTCATTGTGACGGTGCTCTATTTGGTATCATGTTGCCTTTTATCGAACAAGCTCCAAGGATTAGCTTCAAGAAACCTATCGACAGTGTAACTATTTCGGGTCATAAGTTTTTGGGATGTCCTTCGCCTTGTGGTGTTTTGATAACTCGTTTGAAATACATCGATGCCCTCTCAAGAGAATGTGGCATCATTGCTTCAAGGGATGCTACAATCACAGGTAGCCGTAGCGGGCATGCTCCAATCTTAATGTGGTACGCTCTCAAAAAAAGTGGTTTAATAGGACTTGAGAATGAAGTGAATAATTGCATGATGAAATCACGTTACTTACTAAATAAACTACGTGATGCTGGAATTGGTGCAATGTTAAATGAGTTTAGCAACATAGTTGCATTTGAGAGGCCCCAAGATGATCAATTTACCCGTAGATGGAATTTGGCAAGCAATAAAAATATTTCACATGTGGTAGTGTTGAAACATGTTACTATTGAAATGCTTGACTCATTTGTTCTTGAGTTTGTCCAAAAACGATTGATTTGGTCTAAATATGGACAATTTCAGCCTCTATGCATTGCAAACGACGTTGGTTCTAGAAATTGTGCTTGTTCGGTACACAACTTATCTGGAAATTATCAGCTAAATTGTATGTGA 1365 0.3744 MPSLQGINMAMTLIHDAREEKHENIQEENINSLTNLAITQCIGETDANLNALITRYVDTITKNNLRNLGYPTNQDFNYDALAPLIHFHLNNAGDPFLGSSFSLNSMTFEVSVLDWFAKLWEIEKNEYWGYVTSGGTEGNLHGILVGREKFPDGILYTSEDSHYSIPKIARMYRMQCVKVGSLISGEIDCVDLETSLLANKDKPAIINLNIGTTLKGAIDDIDLVIQTLYKCGFTRDRFYIHCDGALFGIMLPFIEQAPRISFKKPIDSVTISGHKFLGCPSPCGVLITRLKYIDALSRECGIIASRDATITGSRSGHAPILMWYALKKSGLIGLENEVNNCMMKSRYLLNKLRDAGIGAMLNEFSNIVAFERPQDDQFTRRWNLASNKNISHVVVLKHVTIEMLDSFVLEFVQKRLIWSKYGQFQPLCIANDVGSRNCACSVHNLSGNYQLNCM* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0839 454 Gene3D Aspartate Aminotransferase, domain 1 328 415 IPR015422 GO:0003824
Tpr1g0839 454 PANTHER SERINE DECARBOXYLASE 16 443 - -
Tpr1g0839 454 Pfam Pyridoxal-dependent decarboxylase conserved domain 106 356 IPR002129 GO:0016830|GO:0019752|GO:0030170
Tpr1g0839 454 SUPERFAMILY PLP-dependent transferases 67 409 IPR015424 -
Tpr1g0839 454 Gene3D - 86 327 IPR015421 GO:0003824
Tpr1g0839 454 PANTHER - 16 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0839 Tpr-Chr1 7090998 7094243 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0839 210 351 Calmodulin-binding Proteins AT2G02000 28.571 1.27e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0839 K25193 - gmx:100781665 654.44