Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g0838 | ATGGATTTACTTGAAGGTGTAGGAGAGAGTTCATCGCCACCGCGTTCATTCGGTGGTTACAACAACTACGATGTAAGGACCGACGTTTATAACCGTTTGGTTGAAACCGGTCACGATCAAGCCGTATCGAATCCTGATTTCCGTGAACAGATTGAAGCTCATTTCAATCGTTTACCTCCAAGTTATGGACTTGATGTTAATGTTGATAGAGCTGAAGATGTTTTACTTCATAGAAATCTTCTTGATTTGGCAAGAGATCCGGATAAGCGTCCCGTTTACCATATACGCCTCTTAGAGAATATTTCTACTAGGACAGATGGTGAAGATCAACAAATTGGAAGTTCTCATACTAGCCCTGAGGAGGAGACATCTTCTCATGCGAGAAATGAGGGAGTCATAGCATCTCTTAAAAGAACAAGAGATCTGGCAATTGAATTTGAGTCTTGCTCGAAGCTTGAGGACTTAAATTTGGATGTTATGAAGAACTCCAAGGAGACACAGGAAAAAATTGTACCTGACAGCTTTTCTCAGAGGCATGAACATTCAAGTGTCCCAGTTCATGAAATAATATTTTCTGCTGTTGACAAACCAAAGCTTTTAAGTCAGCTATCCGCTTTGCTGTCTGATATTGGGCTTAACATCCGGGAAGCACATGTATTTTCCACAACTGATGGCTACTCCCTCGATGTTTTTGTGGTAGATGGATGGCCACTAGAGGAAACCGAAGGTTTGTATGCTGCTATGGAAAAAGCTGTAGCAAGGAGTGAGGGGTCGTGGTCTCATTCTTCAAATTCTCATTCAGCTGTGGCAAAAGCCTTAGCAGCAGAAGGAAAATCCGGAGACTGGGAAATAGACAGGAGATCGTTAAAGATAGGAGAAAAAATAGCATCTGGATCCTGTGGAGATTTGTATCATGGAGTTTATCTTGGTGAAGATGTTGCTGTTAAGGTGCTGAAATCTGAGCAACTGAATGATGCCTTAGAAGATGAGTTTACTCAAGAAGTAGCAATTTTAAGACAGGTGCGTCATAAAAATGTTGTTCGTTTCATTGGCGCGTGCACAAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGACTGGGGGAAGTCTATATGATTACTTGCACAAAAATCATAATGTCTTGGAGCTGTCTCAATTACTCAAGTTTGCAATTGATGTCTGCAAGGGAATGGAGTATTTGCATGGAAACAACATAATTCACAGGGATCTGAAGACAGCCAATTTGCTGATGGATACACACAACGTTGTTAAAGTGGCAGATTTTGGAGTTGCCCGATTCCTAATTCAGGGGGGAGTGATGACTGCAGAAACTGGAACGTATAGATGGATGGCACCAGAGGTCATAAACCACCAGCCTTATGATCAGAAGGCAGATGTGTTCAGTTTTTCCATAGTACTGTGGGAACTAGTGACAGCAAAGGTACCATATGATACCATGACTCCACTACAAGCTGCTTTGGGTGTGAGACAGGGACTGCGACCAGAACTGCCAAAGCATGGGCACCCTAAGCTATTAGATTTGATGCAAAGATGTTGGGAAGCTGTTCCAAGCAGTCGTCCATCCTTCACTGAGATAAGAGTTGAACTTGAAAATCTTTTGCTTGAAGTGGAGAATAGTTCAGAAACTAATGGTGCTTAA | 1662 | 0.4206 | MDLLEGVGESSSPPRSFGGYNNYDVRTDVYNRLVETGHDQAVSNPDFREQIEAHFNRLPPSYGLDVNVDRAEDVLLHRNLLDLARDPDKRPVYHIRLLENISTRTDGEDQQIGSSHTSPEEETSSHARNEGVIASLKRTRDLAIEFESCSKLEDLNLDVMKNSKETQEKIVPDSFSQRHEHSSVPVHEIIFSAVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPLEETEGLYAAMEKAVARSEGSWSHSSNSHSAVAKALAAEGKSGDWEIDRRSLKIGEKIASGSCGDLYHGVYLGEDVAVKVLKSEQLNDALEDEFTQEVAILRQVRHKNVVRFIGACTKCPHLCIVTEYMTGGSLYDYLHKNHNVLELSQLLKFAIDVCKGMEYLHGNNIIHRDLKTANLLMDTHNVVKVADFGVARFLIQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEAVPSSRPSFTEIRVELENLLLEVENSSETNGA* | 554 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g0838 | 553 | MobiDBLite | consensus disorder prediction | 104 | 132 | - | - | |
Tpr1g0838 | 553 | Pfam | ACT domain | 187 | 234 | IPR002912 | - | |
Tpr1g0838 | 553 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 406 | 418 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g0838 | 553 | ProSiteProfiles | ACT domain profile. | 188 | 260 | IPR002912 | - | |
Tpr1g0838 | 553 | SUPERFAMILY | Protein kinase-like (PK-like) | 278 | 541 | IPR011009 | - | |
Tpr1g0838 | 553 | SMART | serkin_6 | 289 | 541 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g0838 | 553 | MobiDBLite | consensus disorder prediction | 104 | 120 | - | - | |
Tpr1g0838 | 553 | ProSiteProfiles | Protein kinase domain profile. | 289 | 542 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g0838 | 553 | Pfam | Protein tyrosine and serine/threonine kinase | 289 | 536 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g0838 | 553 | CDD | STKc_MAP3K-like | 295 | 533 | - | - | |
Tpr1g0838 | 553 | PANTHER | SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 10 | 547 | - | - | |
Tpr1g0838 | 553 | Gene3D | Transferase(Phosphotransferase) domain 1 | 368 | 552 | - | - | |
Tpr1g0838 | 553 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 10 | 547 | - | - | |
Tpr1g0838 | 553 | Gene3D | Phosphorylase Kinase; domain 1 | 278 | 367 | - | - | |
Tpr1g0838 | 553 | SUPERFAMILY | ACT-like | 187 | 256 | IPR045865 | - | |
Tpr1g0838 | 553 | PRINTS | Tyrosine kinase catalytic domain signature | 363 | 376 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g0838 | 553 | PRINTS | Tyrosine kinase catalytic domain signature | 400 | 418 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g0838 | 553 | PRINTS | Tyrosine kinase catalytic domain signature | 446 | 456 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g0838 | 553 | PRINTS | Tyrosine kinase catalytic domain signature | 465 | 487 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g0838 | 553 | PRINTS | Tyrosine kinase catalytic domain signature | 508 | 530 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g0838 | Tpr-Chr1 | 7070394 | 7082393 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g0838 | 24 | 544 | MAP Kinase Kinase Kinase | AT2G17700 | 50.936 | 8.91e-180 | 516 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Tpr1g0838 | PK_Tyr_Ser-Thr | 4.3e-73 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g0838 | - | - | mtr:MTR_1g099110 | 979.933 |