Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0829 ATGACAGGATTTTGGAGTGTGTTTTGTGGGCAATCCGGTTGTTCAAAGCCTTGCAGTTATTATGATGTTAAGTTTTTCGTTGATCCGTCCACGTGTATCAACCATTTCTTAATATCTTGCTTTGAATTATTGCTGCTCATCATGCTCCTGTTCATAATGATCAAGAATTCATTGTCAAAACCATATCAGGGTCTTATACATGGCCAAAGATATTCAAATCTGCAGCTAGTTTCTGCCATAACAAACGGTGTTCTTGGATTAGTGCATTTAGTCTTTGGTATTTGGATTTTAGAAGAGAAGTTGAGAAAAAACCAAACTGCATTACCTCTTGATTTGTGGTTGCTAGAATTACTTCAGGGATTAACATGGTTGTTAGTTGGTTTAACATTAAGTCTTAAGTTGAAAAAACTTCCAAGATCATGGTTAAGGGTTTTTTCTATTCTTATGTTCTTGGTTTCTGGTATAAACTGTGCTATATCCTTGTTTTATGCAATTAGTAAGATGCAACTGTCACTCAAGGTAGCATTAGATGTTCTATCTTTTCCTGTGGCAATTGTATTGCTACTATGCACATACAAGGAATCTAGGTATAGCGGCACTGACAGAGAAATCAATGAAAGCCTTTATGCCCCTTTAAACGGCGAGTTGAATAAAAGTGATTCTGGTAGTCATGTGACGCTGTTTGCCAAAGCTGGATTCTTCAGTAGGATGACATTTTGGTGGATGAATTCATTAATGAAGAGAGGTAAAGAGAAAACTCTTCAGGACGAAGATGTCGCGAAATTGAGGGAGGAAGATAGAGCAGAAAGTTGTTATGCAATGTTTCTGGAGCAATTAAACAAGCAGAAGCAGAAGGATCCATCCTCACAACCATCTGTTTTGAAGGCAATAGTTTTATGCCATTGGAGAGAAATTTTGATATCTGGATTCTTTGCATTGCTCAAGGTACTTGCACTTTCTTCTGGACCTTTGCTTCTGAATTCCTTTATATTAGTCGCTGAGGGTTATGAGAGTTTCAAATATGAAGGTTTTGTATTGGCCATAGCACTTTTCTTTATAAAAAATATAGAATCTCTATCACAAAGGCAGTGGTATTTCCGCTCGAGACTAATCGGTCTCAAAATTAGGTCGTTGCTAACTGCAGCCGTTTATAAAAAGCAACTGAGGTTATCTAATTCTGCTAGATTGATGCATTCTAGTGGTGAGATAATGAATTATGTGACTGTGGATGCATATAGAATTGGAGAATTTCCTTACTGGTTTCACCAAACGTGGACAACTAGTGTCCAGCTATGTATCTCATTAGTAATACTTTTTCGTGCCATTGGACTGGCTACAATAGCTTCCTTGACAGTGATAGTTATCACAGTACTTTGTAATACTCCACTTGCAAAGTTACAACACAAGTTTCAAACCAAACTTATGGTTGCACAAGATGAGAGATTGAAGGCTACTTCTGAGGCACTTGTGAATATGAAGGTTCTGAAATTGTATGCATGGGAAACCAGCTTTAAAAATTGTATAGAAAGATTAAGGAATGAGGAGCTTAAATGGTTGTCTGCAGTGCAATTGAGAAGGGCATACAACACGTTTCTCTTTTGGTCGTCACCAGTTTTGGTCTCTGCTGCTTCGTTTGGAGCTTGTTATTTTCTTAATGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTGGCCACTTTACGCCTCGTTCAAGATCCGATTAGGACCATCCCTGATGTTATTGGAGTGGCCATTCAGGCAAAAGTTGCATTTGCTCGGATTCTAAAATTCCTGGAGGCGCCCGAACTGCAGAGTGAAAATGTTGGGAAGAGGTGCTCAGAAGGCAATATGAGAGGCTCAATTTCAATCAAATCTGCTGACTTTTCATGGGAAGAGAATAATGTATCAAAGTCAACATTGAGAAATGTTAATTTGGAAGTTAGACCTGGACAAAAGGTCGCAATTTGTGGAGAGGTTGGCTCAGGCAAATCAACTCTCTTAGCAGCAATTCTCAGAGAAGTTCCTAACACTCAAGGGAAAATTGATGTTTATGGGAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAAACAGGTTCAGTAAGGGATAATATATTGTTTGGATCACCTATGGATGCTCAAAAATATCAGGAAACGCTTCACAGGTCTTCACTAGTTAAAGATCTTGAGCTGCTTCCCCATGGAGATCTCACTGAAATAGGAGAAAGAGGGGTTAACTTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCCCGTGCTCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCTTTCAGTGCCGTTGATGCACATACTGCCACAAATTTGTTCAATGAATACATTATGGAAGGACTTGCTGAGAAGACAGTCTTGCTTGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTTTGTTTTGTTGATGTCAGATGGGGAAATCCTACAAGCTGCTCCTTATCAACATTTGTTGACATCAAGCAAAGATTTTCAGGATCTTGTGAATGCTCACAAAGAGACCGCTGGTTCTGACCGGCTTATGGACGTTACTTCTTCTGAAAGAAATTCAAATTCTGTGAAAGAGATTAGAAAAACATATGTTGAGAAGGAAAACCAATTTGAAGCACCAAAAGGCGATCAATTGATTAAGCAAGAAGAGAGAGAGATAGGAGACCAAGGGTCTAAGCCTTACTTACAGTATCTAAGTCAGAACAAAGGATACATATACTTCTCGGTGGCTGTTCTTTCACAGCTTATATTTGTGATTGGTCAAATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAATCCCAAAGTCAGCACTTTGAAATTGATTCTAGTTTACTTGTCGATTGGAGTTACTTCAACAATTTTCTTATTGACGCGAAGTCTTTTTACAGTTGCTTTGGGTCTTCAATCTTCAAAATCCTTGTTTTTACAGCTACTAAACTCTCTATTTCGTGCACCTATGTCGTTTTATGATTCCACGCCTTTAGGACGGATACTTAGTAGGGTCTCTTCTGATCTCAGCATTGTTGATCTCGATGTTCCATTTGGCCTTCTTTTCGCTGTCGCGGCTACTTCGAGTTGTTATGCTAGTCTAGCTGTTTTAGCGGTAGTTACTTGGCAAGTTTTGTTTGTCTCCATACCGATGATTTATTTCGCACTGCGCTTGCAGAGATACTACTTTGCCACAGCAAAAGAACTGATGCGGATGAATGGCACAACAAAATCCTTTGTGGCTAACCATCTAGCTGAATCTGTTGCCGGAGCTGTGACAATAAGGGCCTTTGAAGAGGAAGATCGTTTTTTTGTAAAGAACTTTGATCTAATTGATATCAATGCTTCTCCTTTCTTTCATAGTTTTGCTGCAAACGAGTGGTTGATTCAACGGTTAGAAACAGTTAGTGCAGTTGTTCTTGCATCTGCTGCACTTTCCATGGTTGTACTTCCACCCAGAACATTCTCCTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTTCACTTAACGCTTCTTTAGTATTTTCAATTCAAAATCAATGCAATATAGCTAATTACATAATATCAGTTGAGAGACTAAATCAATATACGCATGTGCCAAGTGAGGCCCCAGAAGTAATAGAAGGAAATCGTCCTCCACCAAATTGGCCAGTTGTTGGTAGAGTAGAAATAAAGGAACTTCAGATACGGTACAGGCCTGATGCGCCACTTGTACTCCGTGGAATCACATGTACATTTGAAGGAGGACACAAAATTGGTATAGTTGGTCGCACCGGAAGTGGCAAGACCACTCTTATTGGCGCTTTATTTCGTTTAGTGGAGCCAACAGGTGGAAAAATCATTGTTGATGGCATTGACATTGGTTCCATTGGACTTCATGATTTGAGGTCACGTTTTGGTATTATTCCTCAGGACCCTACTCTTTTTAATGGAACAGTCAGATACAATTTGGATCCTTTATCTCAACACTCGGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGCTGTCCAAGAGAAAGAAGGCGGTTTAGACTCATCAGTTGTTGAAGATGGCGCGAATTGGAGCATGGGACAACGGCAGTTATTCTGTTTGGGTCGTGCTTTGCTGAGAAGAAGCCGGGTATTGGTGCTCGATGAAGCAACCGCGTCAATTGATAATGCAACTGACTTGATTCTTCAGAAAACCATTAGGACTGAATTTGCTGATTGTACGGTCATCACGGTAGCTCACAGGATACCAACTGTGATGGATTGTACCAAGGTTCTTTCCATCAGTGATGGAAAACTGGTAGAGTATGACGAGCCAATGAAGTTGATGAAGAGAGAAGGATCTTTGTTTGGGAAGCTTGTCAAAGAATATTGGTCTCATTTTCAATCTGCAGAGGCTCATTAA 4440 0.398 MTGFWSVFCGQSGCSKPCSYYDVKFFVDPSTCINHFLISCFELLLLIMLLFIMIKNSLSKPYQGLIHGQRYSNLQLVSAITNGVLGLVHLVFGIWILEEKLRKNQTALPLDLWLLELLQGLTWLLVGLTLSLKLKKLPRSWLRVFSILMFLVSGINCAISLFYAISKMQLSLKVALDVLSFPVAIVLLLCTYKESRYSGTDREINESLYAPLNGELNKSDSGSHVTLFAKAGFFSRMTFWWMNSLMKRGKEKTLQDEDVAKLREEDRAESCYAMFLEQLNKQKQKDPSSQPSVLKAIVLCHWREILISGFFALLKVLALSSGPLLLNSFILVAEGYESFKYEGFVLAIALFFIKNIESLSQRQWYFRSRLIGLKIRSLLTAAVYKKQLRLSNSARLMHSSGEIMNYVTVDAYRIGEFPYWFHQTWTTSVQLCISLVILFRAIGLATIASLTVIVITVLCNTPLAKLQHKFQTKLMVAQDERLKATSEALVNMKVLKLYAWETSFKNCIERLRNEELKWLSAVQLRRAYNTFLFWSSPVLVSAASFGACYFLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVAIQAKVAFARILKFLEAPELQSENVGKRCSEGNMRGSISIKSADFSWEENNVSKSTLRNVNLEVRPGQKVAICGEVGSGKSTLLAAILREVPNTQGKIDVYGKFAYVSQTAWIQTGSVRDNILFGSPMDAQKYQETLHRSSLVKDLELLPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYIMEGLAEKTVLLVTHQVDFLPAFDFVLLMSDGEILQAAPYQHLLTSSKDFQDLVNAHKETAGSDRLMDVTSSERNSNSVKEIRKTYVEKENQFEAPKGDQLIKQEEREIGDQGSKPYLQYLSQNKGYIYFSVAVLSQLIFVIGQILQNSWMAANVDNPKVSTLKLILVYLSIGVTSTIFLLTRSLFTVALGLQSSKSLFLQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGLLFAVAATSSCYASLAVLAVVTWQVLFVSIPMIYFALRLQRYYFATAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFVKNFDLIDINASPFFHSFAANEWLIQRLETVSAVVLASAALSMVVLPPRTFSSGFIGMALSYGLSLNASLVFSIQNQCNIANYIISVERLNQYTHVPSEAPEVIEGNRPPPNWPVVGRVEIKELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPTGGKIIVDGIDIGSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLQEAVQEKEGGLDSSVVEDGANWSMGQRQLFCLGRALLRRSRVLVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLSISDGKLVEYDEPMKLMKREGSLFGKLVKEYWSHFQSAEAH* 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0829 1479 Gene3D - 1217 1468 IPR027417 -
Tpr1g0829 1479 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 70 1479 - -
Tpr1g0829 1479 SUPERFAMILY ABC transporter transmembrane region 294 599 IPR036640 GO:0005524|GO:0016021
Tpr1g0829 1479 Pfam ABC transporter transmembrane region 305 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr1g0829 1479 Pfam ABC transporter transmembrane region 917 1154 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr1g0829 1479 CDD ABC_6TM_ABCC_D2 915 1208 IPR044726 GO:0140359
Tpr1g0829 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 845 IPR003439 GO:0005524
Tpr1g0829 1479 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 70 1479 - -
Tpr1g0829 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 845 IPR027417 -
Tpr1g0829 1479 CDD ABC_6TM_ABCC_D1 307 594 IPR044746 GO:0140359
Tpr1g0829 1479 Gene3D - 616 851 IPR027417 -
Tpr1g0829 1479 Gene3D ABC transporter type 1, transmembrane domain 882 1214 IPR036640 GO:0005524|GO:0016021
Tpr1g0829 1479 Gene3D ABC transporter type 1, transmembrane domain 276 603 IPR036640 GO:0005524|GO:0016021
Tpr1g0829 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1467 IPR003439 GO:0005524
Tpr1g0829 1479 SUPERFAMILY ABC transporter transmembrane region 907 1213 IPR036640 GO:0005524|GO:0016021
Tpr1g0829 1479 CDD ABCC_MRP_domain1 621 822 - -
Tpr1g0829 1479 SMART AAA_5 1259 1451 IPR003593 -
Tpr1g0829 1479 SMART AAA_5 649 822 IPR003593 -
Tpr1g0829 1479 CDD ABCC_MRP_domain2 1231 1451 - -
Tpr1g0829 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 586 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr1g0829 1479 Pfam ABC transporter 1250 1398 IPR003439 GO:0005524
Tpr1g0829 1479 Pfam ABC transporter 640 774 IPR003439 GO:0005524
Tpr1g0829 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1223 1460 IPR027417 -
Tpr1g0829 1479 ProSitePatterns ABC transporters family signature. 747 761 IPR017871 GO:0005524
Tpr1g0829 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1196 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0829 Tpr-Chr1 6901733 6909134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0829 619 867 Calmodulin-binding Proteins AT2G36910 30.741 2.33e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0829 K05666 - gmx:100811468 2394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0829 1 6901733 6909134 Tpr1g0829 1 6901733 6909134 ECH
Tpr2g0762 2 9193352 9200750 Tpr1g0829 1 6901733 6909134 PCT