Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0819 ATGACAAATATGGATGGAGATGTTACCATGGTTGACTCAAATGGTACACATGACAATGCTCTTGATGTGGAGCCTCTCAGTATTAGAATACCGCTAGAACCCCCCTTAGAGCCCGTTGAAGGAATGGAGTTTGCATCAATTGAAGAGGCAAAGAGTTACTACACAAGGTATGCTAAGAACAAAGGTTTTAGTTTTCGCATGGGACGCGTTACTAAATCAAGAACAAATGGTATGATAATTGGTCAAGAAATTCTTTGTTCAAAGGAGGGGTTTCGGGCCAAAAGATATATGAAACAGGATAATAGTAGTCTTATTAAACATGATGAAACAAGGGTGGGATGCAAGGCACGGTTATATTTAAAGAAAAATGATGATAGATGGATTGTTTCTAGATTTATAGGAGACCATAATCACGAATTATTTTCTCCTGGAAGTTCACAGTCTCTTCGCGTACATAGAAAGAAAACTAAAGTGCAAAAAAAACTTGCTGATGTGCTTGATGAATCTGGTTTAGGCCCTAGCAAAACAACATCTATCTTATGTACTGAAAGTATTGGTATTGATAATTTTGGATCTAGCCAGCAAGATGTTATCAATTACTTAAGTGTAAAAAGACAAACACAGTTAGAAAACGAAGATGCTCAATTGATGTTATCATACTTTAAGAATTGTCAGTTGAAGAATACTGGATTTTTCTATGCATTTCAAATGGATGCCGAAGGAAAATTAGCTAATTGTTTTTGGGTTGATTCAAGATCTAGAATTGCTTACAAATATTTTGGTGATGTGGTTACTATTGATCCAACATACTTGACAAGTAAATACAACGTTCCTTTTGTTCCATTTACGGGTGTTAATCATCATCAACAATCCATTCTTTTTGGTTGTGCTCTCTTATGGGACGAAACTGTAGAGAGTTTTGTTTGGTTGCTAAGTACCTGGTTAGAAGCAATGAATGGAGTTTGTCCTAAAACTATTTTCACAGACCAAGGCGCTGCTATCACCAATGCAGTTGGAACGGTGTTTCCAAAGGTTAATCACCGTTATTGTATGTGGCATATTGAGGAAAAAGTTCCAGAGTACTTGAATCATATCTATCATGAACGTGAATTTAAAAATCATTTTTACAAGTGCATTCACCAATCTAACACAATTGAAGAATTTGATTCTGAATGGGGAGCAATGATTGATAAATATGGGTTGCAAGATAATCAGTGGCTACAGGAGATATACTCAATTCGATCAAAATGGGTTCCTGCATGTGTACATCATATTTTTTGTGCCGGAATGTCCACCACCCAAAGGATTGAAAGTATGAATAAGTTTTTTAAGGATTTTTTGAATTCAAGTACTCCATTGAGCAAGTTTGTGACACAATATGAGAAGGCTCTTGATGCATGTTACAACAAGGAAAGGGAGAAAAATGTCAAGACAATGAAGTTAAAACCACTTTTGCGAACTTTATATCCCATAGAAGAAGAAGCTTCAAAAATTTATACAAGAAAATTGTTTAGGATATTTCAAGATGAGTTGGTTGGCTCTCAAATGTTTACCACCGAGAAAGTTGAATTTTCTGATGAAGTGATGACATACAAAGTTCATGAAATTTACAAAGAGAAGCCTAACTATTATGTGACTTTTCATGTAACTTCAAAAGAATCAACTTGTACTTGTCACAAGTTTGAATTTTTGGGTATTCTTTGTAGGCATATCTTAACCGTATTCCTAAAGAAGAAGGTACATTATCTCCCTTCACAGTATGTTCTACAAAGATGGACCCTGAATGCTAAGAAACAAAAAGTTCAAGGATTGTCAATTGAAGAATTTCAAGAAGGAGGAAACAAAGTTTCTAGCACTTTATTGTTTAATAGTGTTATGGTCCACTCTCTTGAATTTTCTGAAAGAGCTTCACGGTCAGAAAAACATCATAATATTGCAATTCAATGTTTGCAAAATGCAATTGAAAAACTTGATCTATTAGAGCTTGAAGAATCAAATGAGGATTGCATTTCAAGTGAGATTGGATTAGGGTCAAGATTATTGGCTAGTAAAGACCAAGTTTGGGTTTCTGATAATGGTACATTTGCTATGGGATTCACTCCATCAAAGACTGATAATCATTTATTCACTTTGGGTATTTGGTTTGCTAGGCTTCCAGGAGATAGAACTTTTGTTTGGTCACCTAATAGAAACTCTCCTACATCACAAGAAGCAGTTTTGGAGCTTGACACCACAGGAAACCTCATTCTCATGGACAAAAAAATCACCATATGGACCTCAAACACATCAAATGCAAATGTTGAATCAGCAACCATGTCAGAATCAGGAAACTTCATCCTTCACAACACAAACAATCATCCTATATGGCAGAGTTTTTCTCAACCTTCTGATACACTCCTTCCAAATCAGCCTCTAACAGTTTCTTCAGAATTAACATCACAAAAATCTTCATCTCATGGTGGTTACTATGCTCTCAAAATGCTTCAACAACCAACTTCCTTAAGTCTTGCACTAACTTACAATCTTCCAGAAACTTACCAATCTTTGTATGAAAATGAATCATCATACGCCAACTATTCTTATTGGCAAGGTCCTGAGATTTCGAATGTAACTGGTGAAGTTATCGCGGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTATATGGAGATTCATCTGATGGCGCGGTTTATGTTTATAAGAATGATAATGATGATGCAGGTTTAGCTTCCGCAATTCATCAATCTACGCCGTTGACTGTTCTTAGGAGACTAACACTCGAAGAGAACGGAAATCTGCGGTTGTACCGTTGGGAAGACGTAAATGGATCGAAACAATGGGTGTCACAATGGGCTGCAGTTTCAAATCCATGTGATATTGGTGGAATTTGTGGCAATGGTATTTGTAAATTGGATAGAACTAAGACAAATGCATCTTGCACTTGTTTGCCAGGAACTTCTAAAGTTGGTAGAGATGGACAATGTTATGAGAATTCATCACTTGTTGGAAAATGTAATAATGGAAAAAACGAAAACATGACATCGTCGCAGTTTAGGATTTCAATGGTTCAACAAACTAATTATTATTTTTCTGAATCTTCAATAATAGCTAATTATAGTGAGAATGATGTTTCTTCTGTATCAAAATGTGGTGATGCATGTTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGACTAAATGAAGAGAGACCATTTTGTTGGGTTTTGAAGAGTTTAAGTTTTGGCGGTTTTGAAGATACGAGTTCTACTTTGTTTGTGAAAGTTAGAGCAAATAGTTCATGGACACCAGAAGGACAAGAAGGAAAGTCTAATAGTTCATCTGATGGAATGGGGAGTGCTAAGGAGAAAGCTGTGATTATTCCAATTGTTTTAGGAATGATAGTTCTCATTTTTTTGCTATGCATGTTACTATATTACAGTGTTCATAGAAAAAGAACTTTGAAAAGAGAAATGGAAAGTTCATTGGCCTTATCAGGTGCTCCAATGAATTTTACTTACCGCGCATTGCAAATCAGGACGAGCAACTTTTCACAACTTCTAGGAACTGGTGGATTTGGAAGTGTGTATAAAGGAAGCCTAGGAGATGGTACCCTAGTGGCAGTGAAAAAACTTGATAAGATTTTGCCTCATGGAGAAAAAGAATTTATCACTGAAGTAAACACAATTGGATCAATGCATCATATGAATTTGGTTCGTTTATGCGGCTTTTGTTCTGAGGGACCACACAGGCTTTTGGTTTATGAGTACATGAAGAATGGTTCATTGGATAAATGGATCTTCCCTTCGTATCGAGGGCTAGATAGAATACTAGATTGGCAAACTCGCTTGGATATCGCCATAAATACTGCACAAGGGATTGCATACTTTCATGAGCAATGCAGAAATAGGATCATACATTGTGACATCAAACCAGAAAATATTTTGTTAGATGAAAACTTTTGTCCTAAGGTATCTGATTTTGGACTTGCTAAATTGATGGCAAGGGAACACTCTCATGTGGTAACAATGGTAAGAGGCACTAGAGGTTATTTGGCACCTGAATGGATTAGTAATCGACCTATAACTGTAAAAGCCGATGTTTACAGCTATGGTATGCTTCTTTTAGAAATCATTGGTGGCAGGAGAAATCTTGACTTATCCTTTGATGCAGAAGATTTCTTCTATCCTGGTTGGGCTTATAAGGAGATGACAAACAATGGATCAATAATCAAAGTTGCAGATAGAAGATTAAATGGTGCAGTTGATGAAGAGGAGCTAATTAGAGCTTTGAAAATTGCCTTTTGGTGCATACAAGATGATGTTTCAATGAGACCACCAATGGGAGAAGTGGTGAGAATGCTTGAAGATGAAGGTTCAAATAGCACAAATATAAACATGCCACCAATGCCACAAACAGTACTAGAGGTAATTGAAGAAGGGTTGGACCATGTCTACAAAGCTATGAAAAGAGAGTATAATCACTATAGCTCATTCACCATTACAAGTCATCTTACATCTCATGCCACATGTAGCAACTCCACAATGTCACCAAGATAG 4557 0.3636 MTNMDGDVTMVDSNGTHDNALDVEPLSIRIPLEPPLEPVEGMEFASIEEAKSYYTRYAKNKGFSFRMGRVTKSRTNGMIIGQEILCSKEGFRAKRYMKQDNSSLIKHDETRVGCKARLYLKKNDDRWIVSRFIGDHNHELFSPGSSQSLRVHRKKTKVQKKLADVLDESGLGPSKTTSILCTESIGIDNFGSSQQDVINYLSVKRQTQLENEDAQLMLSYFKNCQLKNTGFFYAFQMDAEGKLANCFWVDSRSRIAYKYFGDVVTIDPTYLTSKYNVPFVPFTGVNHHQQSILFGCALLWDETVESFVWLLSTWLEAMNGVCPKTIFTDQGAAITNAVGTVFPKVNHRYCMWHIEEKVPEYLNHIYHEREFKNHFYKCIHQSNTIEEFDSEWGAMIDKYGLQDNQWLQEIYSIRSKWVPACVHHIFCAGMSTTQRIESMNKFFKDFLNSSTPLSKFVTQYEKALDACYNKEREKNVKTMKLKPLLRTLYPIEEEASKIYTRKLFRIFQDELVGSQMFTTEKVEFSDEVMTYKVHEIYKEKPNYYVTFHVTSKESTCTCHKFEFLGILCRHILTVFLKKKVHYLPSQYVLQRWTLNAKKQKVQGLSIEEFQEGGNKVSSTLLFNSVMVHSLEFSERASRSEKHHNIAIQCLQNAIEKLDLLELEESNEDCISSEIGLGSRLLASKDQVWVSDNGTFAMGFTPSKTDNHLFTLGIWFARLPGDRTFVWSPNRNSPTSQEAVLELDTTGNLILMDKKITIWTSNTSNANVESATMSESGNFILHNTNNHPIWQSFSQPSDTLLPNQPLTVSSELTSQKSSSHGGYYALKMLQQPTSLSLALTYNLPETYQSLYENESSYANYSYWQGPEISNVTGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDNDDAGLASAIHQSTPLTVLRRLTLEENGNLRLYRWEDVNGSKQWVSQWAAVSNPCDIGGICGNGICKLDRTKTNASCTCLPGTSKVGRDGQCYENSSLVGKCNNGKNENMTSSQFRISMVQQTNYYFSESSIIANYSENDVSSVSKCGDACLSDCDCVASVYGLNEERPFCWVLKSLSFGGFEDTSSTLFVKVRANSSWTPEGQEGKSNSSSDGMGSAKEKAVIIPIVLGMIVLIFLLCMLLYYSVHRKRTLKREMESSLALSGAPMNFTYRALQIRTSNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDKILPHGEKEFITEVNTIGSMHHMNLVRLCGFCSEGPHRLLVYEYMKNGSLDKWIFPSYRGLDRILDWQTRLDIAINTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMAREHSHVVTMVRGTRGYLAPEWISNRPITVKADVYSYGMLLLEIIGGRRNLDLSFDAEDFFYPGWAYKEMTNNGSIIKVADRRLNGAVDEEELIRALKIAFWCIQDDVSMRPPMGEVVRMLEDEGSNSTNINMPPMPQTVLEVIEEGLDHVYKAMKREYNHYSSFTITSHLTSHATCSNSTMSPR* 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0819 1518 ProSiteProfiles Bulb-type lectin domain profile. 672 793 IPR001480 -
Tpr1g0819 1518 Pfam MULE transposase domain 263 356 IPR018289 -
Tpr1g0819 1518 SMART 26again6 554 581 IPR006564 GO:0008270
Tpr1g0819 1518 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 664 1518 - -
Tpr1g0819 1518 Pfam D-mannose binding lectin 723 810 IPR001480 -
Tpr1g0819 1518 ProSiteProfiles Protein kinase domain profile. 1181 1469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0819 1518 Gene3D Phosphorylase Kinase; domain 1 1145 1256 - -
Tpr1g0819 1518 Gene3D Transferase(Phosphotransferase) domain 1 1257 1467 - -
Tpr1g0819 1518 ProSiteProfiles Zinc finger SWIM-type profile. 543 579 IPR007527 GO:0008270
Tpr1g0819 1518 Pfam Protein kinase domain 1184 1391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0819 1518 SMART blect_4 679 795 IPR001480 -
Tpr1g0819 1518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1304 1316 IPR008271 GO:0004672|GO:0006468
Tpr1g0819 1518 PANTHER OS07G0415500 PROTEIN 664 1518 - -
Tpr1g0819 1518 ProSitePatterns Protein kinases ATP-binding region signature. 1187 1210 IPR017441 GO:0005524
Tpr1g0819 1518 CDD B_lectin 683 795 IPR001480 -
Tpr1g0819 1518 Pfam SWIM zinc finger 553 578 IPR007527 GO:0008270
Tpr1g0819 1518 CDD STKc_IRAK 1187 1455 - -
Tpr1g0819 1518 Pfam S-locus glycoprotein domain 904 985 IPR000858 GO:0048544
Tpr1g0819 1518 Gene3D - 672 794 IPR036426 -
Tpr1g0819 1518 SUPERFAMILY Protein kinase-like (PK-like) 1160 1454 IPR011009 -
Tpr1g0819 1518 SMART serkin_6 1181 1454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0819 1518 Pfam FAR1 DNA-binding domain 52 141 IPR004330 -
Tpr1g0819 1518 SUPERFAMILY alpha-D-mannose-specific plant lectins 723 797 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0819 Tpr-Chr1 6842569 6852153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0819 1152 1468 Receptor kinase-like Gene Family AT5G20050 44.109 4.79e-74 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr1g0819 Pkinase 2.5e-46 CL0016
TF FAR1 Tpr1g0819 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0819 - - gmx:100794281 1467.98