Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0815 ATGGAACAGAAGCACTTTTTGTTGTCAGCAGCGTTGTTTTTGGGGTTGGGTGTGGGAATTGGAATATGGGTTGATCAAATTGGGTTTTTGTTGGCAGCACTTGGTGTTGAGATTGGGTTGTTGTGTTTAGGACTGGCAATATGGGTTTTTGTTGGTGATCATGTGTCTAATCGAATTTCTTCAAAGGATCAGATTGTGATGGAGGAGCTCATGAAACTAGTTATTGATGGGAAGGATAGTGAAGTTACATTTGATAAGTTTCCTTATTACTTAAGTGAAAGAATCAAAATTTTGTTGACAAGTGCTGGATATTTTCATTTAAAACATGACTCATCCAAGCACACGAGGAACCTTTCGCCAGTAACCCGAGCTATTTTACTTTCTGGACCTGCAGAATTTTATCATGAAGAGCTTGCCAAAGCTTTAGCACATTACTTTGAATCGAAGTTACTGGTTCTAGATGTTAATTACTTCTCTTCAAAGATGCAGGCCAAATACGGATGTCCTGCAAAAGAACCATATTTTAAAAGGTCCATATCTGAGGCGACTCTGGAATGTGTGTCTGGTTTATTTAGTTCTCTGTCAATCCTCGCAGCAACAGGCGCAATCAGAGCTCCTTCGAAGTCGACAAGCCGCTACTTTCTTGATGAAAAGATTTGCTTAAATTCACTCTACAAGGTCTTGGTTTCTATATCAGAAACTGGATCTGTTATTTTATATATCAAGGATGTTGAGAAGGTCTTTCTTCGATCACCAAGGATGTACAGTTTGTTCCAACAGCTATTAAATAAACTTTCAGGATCAGTGTTGGTACTTGGTTCCCGGAATTATGCTTTGACAGATAGATATATAAAAGTTGATGAAAAACTCACTATGGTATTCCCTTACAACATTGATATCAAACCGCCTCAAGATGAGGCTCATATGAAAGTCTGGAAAAGCCAAATAAAAGAGGCCACAAAAAAGACTCAATTGAAAGATTACACCATCCGCGTTGCTGAAGTGCTTGCAGCAAATGACCTTGATTGTGATGACTTGGATACAATCAGCCATACTGACATGATGCTACTCAGTAAGCACGCCGAAGAGATTGTGGCATCGGCAATTTTTAATCACTTGAAGGATAACAAAAATCCAGAATATCGAAATGGAATCCTAATTTTATCAGCCAAGAGTTTGTGTTATGTATTGAGTCTGTTCCAGGAGGGTGAAAGTGGTGAGAAGGATAATAAGAAGACTAAAAAAGAATCAGAAAAGGATGATGCCAGAAAAGATAAACCAAAAGGGACAAAGAAAGACAGTGATATTAAAGCTTCTGCAGAAGCAGATGATGGTGCCGGAAAAGATAAACCAAAAGTGTCAAAGAAAGACAGTGATGTTAAAGCTTCTACAAAAGCACATGATGATGCCGGAAAAGATAAACCAAAAGTGTCAAAGAAAGAAAGTGATGTTAAAGCTTCTACAAAAGCAGAAGATGGTGGCGGAAAAGATAAACCAGAAAGGTCAAAGAAAGACAGTGATATTAAAGCTTCTACAAAAGCAGATGGTGGTGCCGGAAAAGATAAATCAAAAGAATCAAAGAAAGACAAAGCTTCTTCAAAAGTAGATAGATTTTGTTCTGACGCCTTGGAGGAGCAGATAAGAAAAGAGCTTGTTCCGGCAAATGAGATAAAGGTGACTTTTTCAGATATTGGTGCATTGGATGATGTTAAAGAATCACTTCAAGAAGCGGTTATGCTTCCCCTTAGAAGACCAGATCTTTTCAAAGGCAATGGGATTCTGAAGCCGTGTAAAGGTGTGCTGCTGTTTGGACCTCCCGGTACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAAAGAAGCTGGAGCAAGTTTCATCAATGTCTCTTCGTCCACAATACATTCAATGTGGCACGGACAATCTGAAAAGAACGTCCGAGCTTTGTTTTCAGCAGCGGCAAAGGTTGCCCCAACTATTATTTTCATTGATGAAGTTGATAGCATGCTTGGACAACGGTCTACAGGTGAGCATAGTGCAATGAGAAGGGTTAAAAACGAATTCATGTCCCGTTGGGATGGACTATTGTCCAAACCTGATGACAGGATTATTGTTCTTGCTGCCACCAACATGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTCCAGCGCAGGATCATGGTTGGTCTTCCGTCTGCTGAAAATAGGGAAACAATCTTGAAAACTCTTCTAGCTAACGAAAAACATGACGATATAGACTTCAAAGAGCTTTCAACTATGACAGAAGGATATAGTGGAAGTGATCTTAAGAACTTGTGCATGACTGCAGCATATCGCCCCCTTAAGGAGCTAATACAACAGGAGAAGGAAAAAGAAATGAAAAACAAGAAAAAAGTGGCAGAAGCTGAAATCTCAAAAGATGCTTCCAATGATACCGAAGAAGATAAAGAAGATCAAGTGATTGCCCTCAGGCCTTTAAACATGGAAGATCAAGCTGAAATCTCAAAAGATGCTTCCAATGATACCGAAGAAGATAAAGAAGATGAAGTGATTGCCCTCGGGCCTTTAAACATGGAAGATCAAGCTGAAATCTCAAAAGATGGTTCCAATGCTACCGAAGAAGATAAAGAAGACGAAGTGATTGCCCTCAGAGCTTTAAACATGGAAGACATGAGACAGGCAAAGAATAAGGTTGCTGCAAGTTTTGCTTCAGAAGGATCAATTATGTACAAGTTGAAGGAGTGGAATAATTTGTATGGAGAAGAAAGTTCAAGGAAGAAAGAGGAGCAGCTTAGTTATTTCCTTTAG 2808 0.3932 MEQKHFLLSAALFLGLGVGIGIWVDQIGFLLAALGVEIGLLCLGLAIWVFVGDHVSNRISSKDQIVMEELMKLVIDGKDSEVTFDKFPYYLSERIKILLTSAGYFHLKHDSSKHTRNLSPVTRAILLSGPAEFYHEELAKALAHYFESKLLVLDVNYFSSKMQAKYGCPAKEPYFKRSISEATLECVSGLFSSLSILAATGAIRAPSKSTSRYFLDEKICLNSLYKVLVSISETGSVILYIKDVEKVFLRSPRMYSLFQQLLNKLSGSVLVLGSRNYALTDRYIKVDEKLTMVFPYNIDIKPPQDEAHMKVWKSQIKEATKKTQLKDYTIRVAEVLAANDLDCDDLDTISHTDMMLLSKHAEEIVASAIFNHLKDNKNPEYRNGILILSAKSLCYVLSLFQEGESGEKDNKKTKKESEKDDARKDKPKGTKKDSDIKASAEADDGAGKDKPKVSKKDSDVKASTKAHDDAGKDKPKVSKKESDVKASTKAEDGGGKDKPERSKKDSDIKASTKADGGAGKDKSKESKKDKASSKVDRFCSDALEEQIRKELVPANEIKVTFSDIGALDDVKESLQEAVMLPLRRPDLFKGNGILKPCKGVLLFGPPGTGKTMLAKAIAKEAGASFINVSSSTIHSMWHGQSEKNVRALFSAAAKVAPTIIFIDEVDSMLGQRSTGEHSAMRRVKNEFMSRWDGLLSKPDDRIIVLAATNMPFDLDEAIIRRFQRRIMVGLPSAENRETILKTLLANEKHDDIDFKELSTMTEGYSGSDLKNLCMTAAYRPLKELIQQEKEKEMKNKKKVAEAEISKDASNDTEEDKEDQVIALRPLNMEDQAEISKDASNDTEEDKEDEVIALGPLNMEDQAEISKDGSNATEEDKEDEVIALRALNMEDMRQAKNKVAASFASEGSIMYKLKEWNNLYGEESSRKKEEQLSYFL* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0815 935 MobiDBLite consensus disorder prediction 801 830 - -
Tpr1g0815 935 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 482 831 - -
Tpr1g0815 935 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 863 935 - -
Tpr1g0815 935 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 204 436 - -
Tpr1g0815 935 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 26 203 - -
Tpr1g0815 935 Coils Coil 781 801 - -
Tpr1g0815 935 Gene3D - 558 730 IPR027417 -
Tpr1g0815 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 792 IPR027417 -
Tpr1g0815 935 Gene3D - 731 807 - -
Tpr1g0815 935 MobiDBLite consensus disorder prediction 801 823 - -
Tpr1g0815 935 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 204 436 - -
Tpr1g0815 935 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 26 203 - -
Tpr1g0815 935 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 482 831 - -
Tpr1g0815 935 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 863 935 - -
Tpr1g0815 935 MobiDBLite consensus disorder prediction 405 535 - -
Tpr1g0815 935 Gene3D - 56 324 IPR027417 -
Tpr1g0815 935 SMART AAA_5 596 732 IPR003593 -
Tpr1g0815 935 Pfam AAA+ lid domain 751 793 IPR041569 -
Tpr1g0815 935 MobiDBLite consensus disorder prediction 855 877 - -
Tpr1g0815 935 Pfam ATPase family associated with various cellular activities (AAA) 600 729 IPR003959 GO:0005524|GO:0016887
Tpr1g0815 935 CDD AAA 598 730 - -
Tpr1g0815 935 ProSitePatterns AAA-protein family signature. 702 721 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0815 Tpr-Chr1 6809619 6817469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0815 558 830 Calmodulin-binding Proteins AT3G56690 36.918 6.29e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0815 - - pop:7489792 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0815 1 6809619 6817469 Tpr1g0815 1 6809619 6817469 ECH