Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0813 ATGGAGACTGAATCCTTCGTCGATAAGATCGAAGAGAAGTTTCACGACAACAACTCCGGTTCAGATTCATATTCCGATTCCGACGATGATCGCAATAACATCCACTCCAAGAAGCCACCACTACCCGCCTCTAAAGTTAACTCTGTTTACCGTCTTCTCGGTCGCGATCGCCCCGTTCATATGGTCTTAGGTGGTGGAAAACCTGCCGATATTTTACTATGGAGGAACAAGAAATTAACGGGAATGGCACTTGGTGCTGGCACTGCCTTGTGGGTTTTCTTTGAGTTGATGGAATACCACCTCATAACTCTTATCTGCCATTTACTGATTTTGTCTCTTGGGGCCCTTTTCTTGTGGACTAATGCATCTGTCTTTATCCACAAGTCTCCGATGCAAATCCCAAATATTTCGATTCCTCAGGAATCCATTATCGAGGCTGTTACTGTTCTGAGAATTGAGCTTAACCGAGGCTTCACTATTTTTCGGGAAATTGGAACTGGGAGAGATATTAGGAAGTTTCTTACCGTTGTTGGTGTATTGTGGGTTATCTCAGTCATTGGGAGCTGGTTCAATTTCTTGACATTGTTTTATCTATTCTATCTATCACTGTTTACACTGCCACTGGTGTACGAGAAAAACGAAGACCAGGTTGACGCACTAGCTGAGAAGGCAATGATCGAGATCAAGAAACAGTATGCGGTGCTTGATGCTAAGGTTTTGAGCCAGATACCGATCGCAGGGTTGAAAAAGGATTAG 756 0.4378 METESFVDKIEEKFHDNNSGSDSYSDSDDDRNNIHSKKPPLPASKVNSVYRLLGRDRPVHMVLGGGKPADILLWRNKKLTGMALGAGTALWVFFELMEYHLITLICHLLILSLGALFLWTNASVFIHKSPMQIPNISIPQESIIEAVTVLRIELNRGFTIFREIGTGRDIRKFLTVVGVLWVISVIGSWFNFLTLFYLFYLSLFTLPLVYEKNEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIAGLKKD* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0813 251 PANTHER RETICULON 2 249 IPR045064 GO:0009617
Tpr1g0813 251 ProSiteProfiles Reticulon domain profile. 68 251 IPR003388 -
Tpr1g0813 251 MobiDBLite consensus disorder prediction 1 36 - -
Tpr1g0813 251 Pfam Reticulon 69 224 IPR003388 -
Tpr1g0813 251 PANTHER RETICULON-LIKE PROTEIN 2 249 - -
Tpr1g0813 251 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0813 Tpr-Chr1 6801364 6803752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0813 - K20721 gmx:100790190 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1368 5 26494717 26497301 Tpr1g0813 1 6801364 6803752 ECH
Tpr3g0599 3 5880802 5883315 Tpr1g0813 1 6801364 6803752 ECH
Tpr1g0813 1 6801364 6803752 Tpr1g0813 1 6801364 6803752 ECH