Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0807 ATGGCTGAGGATTGGGATCTTTTTGCAATTGTTAGAAGTTGCCAATCAACAACCAATACTAGCACAACCACAACCACAATCAATAGTACTATACCATCTTCCATTAATTCCACTTCAAATTTGAAGGTAGAATTAGAATATGATGCATTTGCTTTTCCTAATATAGTGCAACCTATAACCAATGAGGTTCAAGGGTTAAACCAATTATTCACATCTTTTAACCCCACTACCAATCCCAACACAACTATTATCACTAGTGGTTATGGTATCAATCCTAATTCCCCTAATATTGCAAGATGCATTGGACAACAACATCACAATATTGCTCCTACTACTTCCTCTTCCATTTGGCCTAATTTTGTGCAAGAAGCTTCCACTTCTAGCTTCAACAAATTCCATAACCAACAATTACAACAACATAATCATCATCTACAAGTAATTCAGAAACAAGAATTCCATGTACCTCAAAGCACCCAACCTCAAACACCAAGATCAAGAAAAAGAAAAAGTCAACAAGGGAAAATGGTGTGTCATGTAACTGCGGATAACCTCTCAACAGATTTGTGGGCATGGAGAAAATACGGACAAAAACCCATTAAAGGTTCTCCATATCCAAGGAACTATTATAGATGTAGTAGTTCCAAAGGTTGTACCGCGCGAAAGCAAGTTGAAAGGAGCAACACCGAAGCGGACATGTTTATTGTGACGTACACAGGAGATCACAACCACCCTAGACCGACTCACCGGAACTCGCTCGCTGGAAGTACACGAACCAAGTCTCCGGCGATACAACCACCCACTTCAATTTCTTGTCAACCCAACACGGCGACTTCTTGCTCCTCCTCTTTAGCACCAAACTCTTTTGGTGAGGAAGAAGAAGACATTGACATGGAAATTGAAACCGATGAAGAAGGCGAAGATGGTTGTGATATTCCACAATCCAACAATGGCCAATAA 957 0.4023 MAEDWDLFAIVRSCQSTTNTSTTTTTINSTIPSSINSTSNLKVELEYDAFAFPNIVQPITNEVQGLNQLFTSFNPTTNPNTTIITSGYGINPNSPNIARCIGQQHHNIAPTTSSSIWPNFVQEASTSSFNKFHNQQLQQHNHHLQVIQKQEFHVPQSTQPQTPRSRKRKSQQGKMVCHVTADNLSTDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCTARKQVERSNTEADMFIVTYTGDHNHPRPTHRNSLAGSTRTKSPAIQPPTSISCQPNTATSCSSSLAPNSFGEEEEDIDMEIETDEEGEDGCDIPQSNNGQ* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0807 318 MobiDBLite consensus disorder prediction 248 287 - -
Tpr1g0807 318 MobiDBLite consensus disorder prediction 153 176 - -
Tpr1g0807 318 ProSiteProfiles WRKY domain profile. 180 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g0807 318 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 303 IPR044810 GO:0003700
Tpr1g0807 318 Gene3D WRKY domain 168 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g0807 318 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 3 303 - -
Tpr1g0807 318 MobiDBLite consensus disorder prediction 289 309 - -
Tpr1g0807 318 Pfam WRKY DNA -binding domain 187 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g0807 318 SUPERFAMILY WRKY DNA-binding domain 180 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g0807 318 MobiDBLite consensus disorder prediction 242 318 - -
Tpr1g0807 318 SMART WRKY_cls 185 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0807 Tpr-Chr1 6746526 6748204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0807 164 265 WRKY Transcription Factor Family AT5G52830 79.412 1.27e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr1g0807 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0807 K13425 - cam:101509183 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1357 5 26425817 26427879 Tpr1g0807 1 6746526 6748204 ECH
Tpr6g3636 6 39636773 39638680 Tpr1g0807 1 6746526 6748204 ECH
Tpr3g0607 3 5958344 5960088 Tpr1g0807 1 6746526 6748204 ECH
Tpr1g0807 1 6746526 6748204 Tpr1g0807 1 6746526 6748204 ECH
Tpr2g4184 2 44636363 44654913 Tpr1g0807 1 6746526 6748204 PCT