Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0786 ATGGCGGCAGAACTTTCCACCGCCACAACCTTAAAACCCTACAAACTCCCCCAAACCTTAACTTCCCCTAAAACAACCTCAACACTGTTGTTCTTCACCCCTTTAAGAGACTTCCGTCATAGCAAAATCCTTCAAACACAAACAAGAACAACAACTAAGAAGCGCTTCACCGTTTGTGTTATCACGGATGATCCAAAAAACAGTACCCAAATTAAAACAGAGGAAAACTCAGAACCTCCCATTAATAAAACCAACCCTCATTTTTTAGTTACACAAAAATTGGCTAGAAAAAAGTCACAAAGGTTCACTTACCTTGTTGCTGCTGTAATGTCTAGCTTTGGTGTTACCTCTATGGCAATTTTAGCTGTTTATTATAGATTCTCATGGCAAATGGAGGGTGGTGGAGAGGTTCCTTGGTCTGAAATGTTTGGTACATTTGCCCTCTCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCAAGATGGGCTCATAAGGTTCTATGGCATGCTTCCTTGTGGCATATGCACGAGTCACACCATCGACCAAGAGAAGGTCCATTTGAGCTTAATGATGTTTTTGCAATAATTAATGCTGTCCCTGCAATTGCACTTCTCTCATTCGGTTTTTTTAACAAGGGATTGCTTCCTGGACTCTGTTTTGGTGCAGGTCTTGGAATTACAGTGTTTGGGATTGCATACATGTTTGTCCATGATGGATTGGTTCATAAGAGATTCCCTGTGGGTCCCATTGCCAACGTGCCTTATTTCACAAGAGTTGCTGCTGCTCATCAACTCCACCATTCGGACAAATTCAAAGGGGTGCCATATGGGCTCTTTTTAGGACCAAAGGAAGTTGAAGAAGTGGGAGGGTTGGAAGAGCTAGAGAAAGAGATAAGTAGAAGAACAAGATCATATACCGGCTCATGA 927 0.4272 MAAELSTATTLKPYKLPQTLTSPKTTSTLLFFTPLRDFRHSKILQTQTRTTTKKRFTVCVITDDPKNSTQIKTEENSEPPINKTNPHFLVTQKLARKKSQRFTYLVAAVMSSFGVTSMAILAVYYRFSWQMEGGGEVPWSEMFGTFALSVGAAVGMEFWARWAHKVLWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFNKGLLPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFTRVAAAHQLHHSDKFKGVPYGLFLGPKEVEEVGGLEELEKEISRRTRSYTGS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0786 308 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 17 308 IPR045019 GO:0016491
Tpr1g0786 308 Pfam Fatty acid hydroxylase 152 279 IPR006694 GO:0005506|GO:0008610|GO:0016491
Tpr1g0786 308 PANTHER BETA-CAROTENE HYDROXYLASE 17 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0786 Tpr-Chr1 6641141 6643581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0786 1 222 Chloroplast and Mitochondria Gene Families AT4G25700 59.031 7.29e-88 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0786 K15746 - gmx:100802778 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0786 1 6641141 6643581 Tpr2g4271 2 46028441 46032026 ECH
Tpr1g0786 1 6641141 6643581 Tpr1g0786 1 6641141 6643581 ECH
Tpr2g4271 2 46028441 46032026 Tpr1g0786 1 6641141 6643581 PCT