Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0776 ATGTCTTCACCGGGATTCCCCGGTAGTGGTGGTTCCTCTGATTTCTACGGCGGAGCTGCTAGTTTTTCTGGTAGATCTATCACACTTCCATCATCCAACATGTCCAACATGAACAACAACAATATCATCAACAATAACAATAACAATTATCTCTCAAACATAGCCACCAACACACATAACCTTCATCAACCTTTCTACCGAACCCAACAACAACAGCTTCCATCGATTTTCATCGATCCTTCTTCCCAAATCCAACAACGTCAAACATCTTCCCTCATAGGGAAACGAACCCTTGCTGAATTTCAAACCCAAAACATCAACAACATCAATAACATCACCAACAACAACAACCTTAACCTTCACAATTTCAATAATAATAATCTGAACCATAATCTGAACCACCACCACAACAACAACAACAACAATACTGTTCTTTCAAACCTTTTACTTCGTTCTGTGAAACCTAGGAATTTCCAACATGGTTCTCCTATGTCTCCTCTTTCTCCAATTGATTTCACAAATTCATCACCTGAATTCATCAACCCTTCTTCTTTTTCTTCACCACGTTTGGGTTTACCGCTTCGCTCAATATCAAACCCTATTGTTCAAAACCCATTACCCATGAACAATTCAATTCTGCAAAACACCAATTATCTTTATCAAAATTCTAATTTTTCGCAGATTCAGAACAGGGTAATTCCAACTAGCCATGACCCACCTAAGAAAATGATGGATCATCGTTTTCTGGAGTTGGAAAAACAGCTTCTTGAAGACAATGATGAAGAAGGAGAACAAGACGCAGTTTCTGGAATTACAAACAGCGAATGGTCTGAAACAATTCAGAATTTGATTAGTTTCGAGAAAAACCCGACCCAGAAACCCGATTCATACTCACCCACTTCTTCAACAACATCACTGAACTCATGTTCTTCATCTGTTGTTTCTCCTGCTTCTGGTTGTTCAAAGCAATTGTTGATGGAAGCTGCAACCGCAATTTCCGAAGGTAAAATGGAATCTGCTTCAGAGATCCTTAATCGTATGGCTCAGAATCCGAACCCGATAATGAATTCTGATCGTCGATTAATGGATTGCATGGTTTCAGCGTTGAAATCACGCGTGAATCATGTTGAAAATCCACCTCCGGTAGTGGAACTGTTTAGCAAAGAACACGCTGAGTCAACTCAGCTTCTCTTTGATCATTCTCTCTGCTTTAAGGTCTCTTTCATGGCTGCAAACATCGCAATCCTCGAAGCAGCATTCGAAGAAACAACAGAGAAAGATAACAACAACAACAACAACAACAACAACGTGATGAAGCTATGCGTGGTGGATTTTGATATTGGTCATGGAAAACAATACATGGCCCTTCTCAATGAACTCCACGCGCGTCTCAATGGTTCACCGGCGACGTTGAAGATCACGGCGGTGGCGGAGAACGACGATGAAGAATGGCTGAAGATTGTGGGAGAAAATTTGGGTCGACAAGCGGAGCGTTTAAGAATTGGGTTTGAATTAAAAGTGGTAACACAAAAACTTGCTGAGTTAACTCGCGAGTCATTAGGTTGTGACTCGGAGGATATTCTTGCTGTGAATTTCGCGTTCAAGCTATTCAGAATGCCAGACGAAAGTGTGTCAACGGAGAATCCACGCGACGCGCTTCTTAGGAGCGTGAAATCACTCGCGCCTCATGTTGTAATTGTTTTGGAGCAAGAAATTAATACCAATACGGCACCGTTTGTTGCACGTGTGGCTGAGTCATGTTCATATTACGGCGCGCTGTTTGATTCACTCGAGTCTACTATGGGGAAGGAGAACTCGGAGCGAGTCAAGATTGAGGAAGGACTGAGTCAGAAACTGTGTAACGCGGTTGGTTGTGAAGGAAGAGATCGCGTGGAGCGTTGTGAAGTGTTTGGGAAGTGGCGTGCACGCATGAGTATGGCTGGGTTTAGGTTAAACCCAGTGAGTCAGAAAGTGGCTGAGTCAATTAAAGAGCGGCTTGCGCCAGGAAGCCGAGTTACTGTTAATGAAGAAAACGGTGGCGTTTGCTTTGGTTGGATGGGAAGAACTCTCACCGTTGCATCTGCTTGGCGTTAA 2094 0.4284 MSSPGFPGSGGSSDFYGGAASFSGRSITLPSSNMSNMNNNNIINNNNNNYLSNIATNTHNLHQPFYRTQQQQLPSIFIDPSSQIQQRQTSSLIGKRTLAEFQTQNINNINNITNNNNLNLHNFNNNNLNHNLNHHHNNNNNNTVLSNLLLRSVKPRNFQHGSPMSPLSPIDFTNSSPEFINPSSFSSPRLGLPLRSISNPIVQNPLPMNNSILQNTNYLYQNSNFSQIQNRVIPTSHDPPKKMMDHRFLELEKQLLEDNDEEGEQDAVSGITNSEWSETIQNLISFEKNPTQKPDSYSPTSSTTSLNSCSSSVVSPASGCSKQLLMEAATAISEGKMESASEILNRMAQNPNPIMNSDRRLMDCMVSALKSRVNHVENPPPVVELFSKEHAESTQLLFDHSLCFKVSFMAANIAILEAAFEETTEKDNNNNNNNNNVMKLCVVDFDIGHGKQYMALLNELHARLNGSPATLKITAVAENDDEEWLKIVGENLGRQAERLRIGFELKVVTQKLAELTRESLGCDSEDILAVNFAFKLFRMPDESVSTENPRDALLRSVKSLAPHVVIVLEQEINTNTAPFVARVAESCSYYGALFDSLESTMGKENSERVKIEEGLSQKLCNAVGCEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVAESIKERLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0776 697 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 87 696 IPR005202 -
Tpr1g0776 697 Pfam GRAS domain family 322 697 IPR005202 -
Tpr1g0776 697 MobiDBLite consensus disorder prediction 288 309 - -
Tpr1g0776 697 PANTHER SCARECROW-LIKE PROTEIN 8 87 696 IPR030013 -
Tpr1g0776 697 ProSiteProfiles GRAS family profile. 312 697 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0776 Tpr-Chr1 6561688 6564350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0776 68 697 GRAS Transcription Factor Family AT5G52510 46.809 2.18e-151 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr1g0776 GRAS 5.1e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0776 - - aip:107644872 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4264 2 45958689 45960931 Tpr1g0776 1 6561688 6564350 PCT