Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0770 ATGCCTACATGGTGGGGAAAATCATCGTCAAAAGAAACCAAGAAGAAAGCAGGTAAGGAAAGTATTATTGATACATTGCACCGAAAATTTAAATTTCCATCTGAGGGTAAACTAAGCAGTATATCCGGAGGATCTCGTAGACGATGCAATGACACAATTTCAGAGAAGGGGGGTCATTCTCCATCTGAAACAAGATCTCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTGCAGAAAGACCTCACGCTCAACCACTTCCACTTCCTGGTCTGCACCCTTCAAGTGTAGGTCGAGTGGATTCTGAAATTAGTATATCAGCGAAATCGAGACTGGAAAAGTCCTCCAAGCCATCATTGTTTCTTCCTCTTCCGAGACCTTCATGCATACGTTGCGGGCCAAATCCTGCAGATTTGGATGCAGATATGGTCAATGCTTCAGTCTTCAGTGATTGCTCTGCTGATAGTGATGAGCCAGCAGACTCACGGAATCGTAGTCCTCTCGCAACTGACTCTGAAACTGGGACTAGAACTGCCGCTGGTAGTCCTTCCAGCTTGATGCTCAAGGATCAACCGTCTGCTGTTTCACAAGTGAATTCGAGAGAAGTCAAAAAATCGGCTAACATTCTAAGTAATCAGACACCTTCTACTTCACCAAAACGGAGGCCATTACGTCACCATGTTCCAAATCTTCAGGTTCCGCCCCATGGTATCTTCTATAGTGGTCCCGACAGTTCCTTGTCAAGTCCATCAAGGAGTCCATTGAGGGCATTTGGTACAGATCAGGTGTTGAACTCCGCTTTTTGGGCCGGAAAGCAATATCCAGAGGTCAATTTCATTGGATCTGGACACTGCTCTAGTCCAGGTTCTGGTCACAATTCAGGGCATAATTCAATGGGAGGGGACATGTCGGGACCATTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCGGTACCTAGTCCTAGAATGACTAGCCCTGGTCCAAGCTCAAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCCGCTGGAACACCGACTGAATCACAGACAGGACGGGTTGATGATGGAAAACAACAGAGTCATCGTTTGCCACTCCCTCCTTTAACAGTTAACAATACCTCGCCCTTCTCTCATTCTAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCAGATAGTCCAATGAGCTCTGGATCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACACGTCTATATTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTATGTTTTCAGATGATGCTAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAATTCATTTATTGAGCCGTTTAAGGCATCCAAATATTGTGCAGTATTATGGTTCTGAAACAGTAGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGACAATTTGGCGAACTAGCTATTCGAAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTTTTTACATGCTAAAAATACCCTACACAGGGATATCAAAGGAGCAAACATACTGGTAGATCCAAATGGTCGGGTCAAGGTTGCAGACTTTGGCATGGCAAAACATATAACAGGACAATACTGTCCATTGTCATTCAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTTATAAAGAACTCTAAGGAATGTAGTCTTGGTGTGGATATATGGAGTCTCGGTTGCACAGTTTTGGAAATGGCTACAACTAAACCGCCTTGGTCTCAGTATGAAGGGGTTGCAGCAATGTTCAAAATTGGCAACAGCAAGGAGCTCCCAACGATCCCCGATCATCTCTCAGACGCAGGAAAAGATTTTGTTAGAAAATGTCTACAACGTAATCCACGTGATCGCCCTTCAGCAAGTGAATTATTGGACCACCCTTTTGTAAAAGGTGCTGCACCTTTGGAAAGACCTATTATGGTTCCTGAAGCTTCAGACCCTGTTTCTGGAATTACACATGGAACAAAAGCTCTGGGCATTGGACAAGGAAGAAATCTGTCTGCGTTGGATTCAGATAAACTCTTAGTTCATTCTTCTAGGGTTTTGAAAAGTAATCCTCATGAAAGTGAAAACCATATTCATAGGAATATATCTTGCCCGGTCTCTCCCATTGGAAGCCCGCTTTTGAGGTCAAGATCACCACATCAGAGGAGTGGGAGATTATCACCTTCTCCTATATCTAGTCCTCGGACTGCTTCTGGTGCATCCACCCCTCTCACTGGCGGCAGTGGTGCCATTCCATTTAATCACTTAAAACAGGCTGCTTACTTTCAAGAGTGTCTCGGAAGCATGCCAAAATCCTCAAACGGTGTCTACATGAACGGCTCTACTCACCACGACCCAAATATTGACATTTTTCGGGGAATGCAAACCGGGTCTCACATTAAATCAGAACTTGTGTCCAGCGAAAACGATGCTCTCAGTAAGCAGTTTGTAAGGTCTCCTCATGCAGAGCCATATGACTTTCAGTCTGTCTTAGCTGATCGTGTTGGCCGGCAGCTTCTGGGAGATCATGTTAAGATTAACCCATCATTTGATCCGAGTCCCAGCTCGTCGATGCTCCACCGAACAAATGGTTTATGA 2697 0.4446 MPTWWGKSSSKETKKKAGKESIIDTLHRKFKFPSEGKLSSISGGSRRRCNDTISEKGGHSPSETRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSVGRVDSEISISAKSRLEKSSKPSLFLPLPRPSCIRCGPNPADLDADMVNASVFSDCSADSDEPADSRNRSPLATDSETGTRTAAGSPSSLMLKDQPSAVSQVNSREVKKSANILSNQTPSTSPKRRPLRHHVPNLQVPPHGIFYSGPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKQYPEVNFIGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAAGTPTESQTGRVDDGKQQSHRLPLPPLTVNNTSPFSHSNSAATSPSMPRSPARADSPMSSGSRWKKGKLLGRGTFGHVYIGFNSESGEMCAMKEVTMFSDDAKSMESAKQLMQEIHLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAFLHAKNTLHRDIKGANILVDPNGRVKVADFGMAKHITGQYCPLSFKGSPYWMAPEVIKNSKECSLGVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSDAGKDFVRKCLQRNPRDRPSASELLDHPFVKGAAPLERPIMVPEASDPVSGITHGTKALGIGQGRNLSALDSDKLLVHSSRVLKSNPHESENHIHRNISCPVSPIGSPLLRSRSPHQRSGRLSPSPISSPRTASGASTPLTGGSGAIPFNHLKQAAYFQECLGSMPKSSNGVYMNGSTHHDPNIDIFRGMQTGSHIKSELVSSENDALSKQFVRSPHAEPYDFQSVLADRVGRQLLGDHVKINPSFDPSPSSSMLHRTNGL* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0770 898 MobiDBLite consensus disorder prediction 882 898 - -
Tpr1g0770 898 SMART serkin_6 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0770 898 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Tpr1g0770 898 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g0770 898 Pfam Protein kinase domain 412 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0770 898 MobiDBLite consensus disorder prediction 34 100 - -
Tpr1g0770 898 SUPERFAMILY Protein kinase-like (PK-like) 398 684 IPR011009 -
Tpr1g0770 898 CDD STKc_MEKK1_plant 410 667 - -
Tpr1g0770 898 MobiDBLite consensus disorder prediction 314 412 - -
Tpr1g0770 898 MobiDBLite consensus disorder prediction 370 404 - -
Tpr1g0770 898 MobiDBLite consensus disorder prediction 165 219 - -
Tpr1g0770 898 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 815 - -
Tpr1g0770 898 MobiDBLite consensus disorder prediction 151 224 - -
Tpr1g0770 898 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0770 898 MobiDBLite consensus disorder prediction 749 775 - -
Tpr1g0770 898 Gene3D Transferase(Phosphotransferase) domain 1 408 684 - -
Tpr1g0770 898 MobiDBLite consensus disorder prediction 55 73 - -
Tpr1g0770 898 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 815 - -
Tpr1g0770 898 MobiDBLite consensus disorder prediction 879 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0770 Tpr-Chr1 6488980 6495670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0770 4 896 MAP Kinase Kinase Kinase AT1G63700 58.463 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr1g0770 Pkinase 2.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0770 K20717 - gmx:100797994 1496.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0770 1 6488980 6495670 Tpr1g0770 1 6488980 6495670 ECH