Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0766 ATGCCAGTTGCGAAACTTACTGCTTCAGGTACTCCCAATTTTATGAAAACAGAAGACGGAAATGATTCTTTGGATACATTAATCAGACAAGCAGTTGGAAAAGAACCTTTCCTTTCGTTTCCTAGGGCTGCTGACCGGCCGGCTCAGTGGATTCAATTATTTCATGCTTTAGAACAGCAACAAGAAATTCCAGGGTGGCCTTTGTTCTCTCCTGCAAAGGTTCAGTTATATAAGTGCGACAAGTGTACCAGAGAGTTTTGCTCACCCATTAATTATAGAAGACATAAACGTGTATACCATCGGTTGAAAAAGCTTGATAAGGACTCTAAGAAAAATAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGCTGTGTCATTTGAGAATGTGACACTAGAGGAGGTTCCAGGGTCTTCAATTTTACAAGCTCTCTCAACTCTTAGAACACAACAAGGATTCTATTCTCTTCCACATAATTATCTCAGAGCTGGCTTTTCTCTTTTGGATATTGTTCAATCCAGGTCGTCTAGTTTCCCCATATCTTCCCAGAAGTTGTTCGATATTCTTGATGATTCCAGTGAAAAAACATTTTTATGTGGAACAGCAGTGTCAATGCAAAGACATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTCGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAATTGGTGAATGCGTGGCTCGCAGACAAAGATGCCGAAGCATTGAGATGCCAGAAGCTGCTGATGGAGGAGGAGGAAGCTGCTCAGAAAAGAAAAGCTGAAATTTTGGAGAGAAAACGCCAGAAAAAGCTTAGGCAGAAGGCGAGGAGCCGACTTGAAAATGACACAGAAATTAAAGGGAGCATCAGCAGCACAGGAGAGGATGTATCACCAGAGGAAGGATCTTTGGCTGCATGTGACTTTGAAGCACATAGAGAAGATGTATTTGCAGATCATGCTTCTTCACCACATGTAACTTATCACTTTCTAGACACCAATGAATGTGTCGATGGGGATACACAGTCAGGATACGACTGTGACACTGATCAGAACATGGAGCCACAAACATCAGAAAGGGATGCACAGTCAGGTTATGATTGTGACACTGATCGGAATTTAGAAAGACAGACATCACACAGACATAACCCTCGGCGCACAATGGCTGCTAGACGGCAAGGGCTTCCTAAGTCACAACGAACTATTGCCAATGGTTTGTATGCAAGCCAGAACTCTCAAAAGTCAAAGTTTGGAGTCATTCCAAAATATGGAAATGGAACAAATCGTGATCAAAGGGCAGCTCCTACAGTTAATGGTGGTAAAGTTTGGAGCCGGAAGCCTAAACCAGAAACAGATGCAGTGGTTTTAAAAACCAGACTGCACAAAGAACCAGCCAAAATTAAGAATAATGAGGTTTTGATAGGATCTGTATCAGTTACACTGGCCAATTGCAGCCGATCAGAGTGTCATCTTGTCACATCTCAAGAGGACAGTTTAGTAGAGAATTTGGCCGACCAAAATGTTGCTCAGGAGAAGCCAATTAAAACTGACTCCTTTCACGGAGGCAACAATCGGTCAAGAGTTAAGCTTTGGAGACCAGTTAGCCAGCACGGAACTAAAAATCCAATGCCACTTGAAAGTGTTGGGACAGAAGTTGATGTAGTCTATGGAAAAGATGATCAAAATTTGTCAGTTCAAAGTAGTTTAAGGTTGTGTAATATAGATGGAGGTGATATTGGTTCTGGGAATAAATCCCATATCCATGCTGCAAAAGCCTTTCTTGCACAAAGATGGAAGGAAGCAATTTCATCAAATCATGTGGAGTTGGTAATTTCACCTGACCCTGAACCTCCCGGGTTCCAGCCAGTCCAGGATTGCGAGATAGCATCACGTCGATCTTCTAATACGGAGAGATATAGCATTCTTGCAAATACAGAGAACTTGTTGCCTGCAACTACCGGAGTTGCTAAATCCAAACCCAGAGTAAAGCCTGATAAGGGAATCAAGATAAAGTACATTCCAAAACTAAAAGCTGCAGCATAA 2082 0.4217 MPVAKLTASGTPNFMKTEDGNDSLDTLIRQAVGKEPFLSFPRAADRPAQWIQLFHALEQQQEIPGWPLFSPAKVQLYKCDKCTREFCSPINYRRHKRVYHRLKKLDKDSKKNRDLLGAYWDKLSIEEAKEAVSFENVTLEEVPGSSILQALSTLRTQQGFYSLPHNYLRAGFSLLDIVQSRSSSFPISSQKLFDILDDSSEKTFLCGTAVSMQRHVFDGEAGKIGLEPKNLVACTSFLLEQKLVNAWLADKDAEALRCQKLLMEEEEAAQKRKAEILERKRQKKLRQKARSRLENDTEIKGSISSTGEDVSPEEGSLAACDFEAHREDVFADHASSPHVTYHFLDTNECVDGDTQSGYDCDTDQNMEPQTSERDAQSGYDCDTDRNLERQTSHRHNPRRTMAARRQGLPKSQRTIANGLYASQNSQKSKFGVIPKYGNGTNRDQRAAPTVNGGKVWSRKPKPETDAVVLKTRLHKEPAKIKNNEVLIGSVSVTLANCSRSECHLVTSQEDSLVENLADQNVAQEKPIKTDSFHGGNNRSRVKLWRPVSQHGTKNPMPLESVGTEVDVVYGKDDQNLSVQSSLRLCNIDGGDIGSGNKSHIHAAKAFLAQRWKEAISSNHVELVISPDPEPPGFQPVQDCEIASRRSSNTERYSILANTENLLPATTGVAKSKPRVKPDKGIKIKYIPKLKAAA* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0766 693 MobiDBLite consensus disorder prediction 364 406 - -
Tpr1g0766 693 MobiDBLite consensus disorder prediction 377 395 - -
Tpr1g0766 693 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 105 IPR013087 -
Tpr1g0766 693 Coils Coil 260 294 - -
Tpr1g0766 693 MobiDBLite consensus disorder prediction 285 315 - -
Tpr1g0766 693 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 691 - -
Tpr1g0766 693 ProSitePatterns Zinc finger C2H2 type domain signature. 79 100 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0766 Tpr-Chr1 6466812 6473676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0766 18 688 C2H2 Transcription Factor Family AT4G25610 40.473 7.59e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr1g0766 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0766 - - cam:101491132 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0766 1 6466812 6473676 Tpr1g0766 1 6466812 6473676 ECH
Tpr2g4400 2 47990730 48002665 Tpr1g0766 1 6466812 6473676 PCT