Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0765 ATGGGTAGCATCCAAGAACCAGTATCGCTTCCAGAAGAGCAACTCGAGGTTGTACAAAACGACACCGTTTACGTTGCGGTGGGAAATAACGCGGAGAAGAACCATAAACTATTGCATTGGGTAATTCAGAATTTCTCAGGGAAGAAAATTTGCCTTCTTCATATTTTGATACCCGACCTTGTCAATTCCTTCAATACAAATGTCTCTGAATATGAACATAAAGACCATGCAATTAAGGCATTCAAGGAGCATGGTAGTCAAAAGGTGCATGAATTCCTAGACCAGTACATCCTCACTCTGGTCCCAGCAGGGGTACAGGCCTCTAAATTGTTGATCGAGAAGGACAATATTGAGAAAGGGATCAAAGAAGCTATTTTTCAACACAATATTAGATGTCTTGTAATGGGAGCAGCTGCAGACAGACATAAGACAGGGTTAGATAGTGAAGACACGCCTGGAATAGAGACTACGCCTGTTTTGTTGATGCTCGACTCAAATACAGAAGCCAAACAATCTGAAAAAATTAAATCAGAATTGATTCCTAATGTATTGAAATATTTAGATTCTAGTGATATGGAAGAGACTGAAAACATTATTGCAAGGACAAAGTTGACAGAATTGGTTATTCATGAGGATGATGAAGCATTACAAAACTGGCGTGCTAAGGAGATAAGTAGAAGAAAAGAAGTTGAAAAACAACTGGCAAGGAAAAAGCAAGACGTACTAGAAATGAAGAATCAGCGAGATAAAATAATATATGAATTACAAATGGTCCGAGACCAAAGTTCAGCTCTTAGAAACCAATTGTTTGAGTCCAATTGTACAGCAACTGAGTTGGAAGAGAAGTTTCTATCTGCTGTGGACCTTTTGATAAGTTTCAAGGAAAAACGAGATAAGCTAAGGATAGAACATGCAAATGCAGTTAGGAAAGTCAAAGTGCTGACAAAAATTGGAGAAGCGGATACTACATCCTCTTATGTGGTAGAATTCCCTACATTTTCTTTCATGGAGATCAATGAGGCAACTCATGATTTTGACCAATCTTGGAAAATTGGTGAGGGAAGGTATGGATGTGTTTACAAGGGACTGCTTCGCAACATGCTTGTTGCCATAAAAATGCTACCCTCTTATGGTTGCCAGAGCCAATTGGAGTTCCAGCTTCAGGTAGAGGTTTTAAGTAGAGTAAGACATCCAAATCTGTTAACGCTAATTGGAAGCTGTGCAGAGTCTAAGTCACTTGTGTATGAATACCTAAACAATGGTAGCCTTGAAAGCCATCTTGCCTGCAAAAACAAGACTCCACTTCCATGGCAAATTCGAATATCTATTGCTACTGACATATGCTCTACTCTTATCTTCCTTCACTCCAGTGAGCCTTGTATTGTCCATGGGAATTTGAAGCCTAGTAAGGTTCTCCTAGATGCTAACTTTGTTGCCAAACTTGGTGACTTGGGGATTCCTTATTTAGTCCAGCATAGTGTGGATTCAGCTGACTCAAGCCCAGTAATATGTAACAACTCTCATGAAAATTTGGCGTATGTGGATCCAGAGTATCTTGACACTGGTAAACTTACACCAGAATCAGATGTGTATTCATTTGGAATCATACTGTTGCAACTTTTAACTGGAAGACCACTTTCGGGGCTAGTTAGAGATATGAGATGTGCATTGGAAAAAGAAAATCTTAAAACTGTGTTGGACTCGTCAGCTGGTGAATGGCCTCTTTATCAAACCACACAACTGGCATATTTAGCATTGAGGTGTTGTGAGAAGACTTGGTTAAACCGGCCAGATCTTGTGTCAGAAGTCTGGAGTGTTCTTAAACCATTCAGAACTATTTGCATAGACAGGAGACAAGAGTTGACTTCTAAGAAGCTTCAACGAGCTCCTTCTCATTTTGTCTGTCCAATTGTCCAGGAAGTTATGGAAGATCCATACATAGCTGCAGATGGCTTTACATATGAAGAAGAGGCAATAAGAGGATGGTTGGACAGTGGTCACGACACTTCTCCTATGACAAACCTCACACTTGAACACACAGATTTGGTACCTAATTATGCACTACATAATGCCATTCGGGAGTGGCAACAACAGTGA 2097 0.4006 MGSIQEPVSLPEEQLEVVQNDTVYVAVGNNAEKNHKLLHWVIQNFSGKKICLLHILIPDLVNSFNTNVSEYEHKDHAIKAFKEHGSQKVHEFLDQYILTLVPAGVQASKLLIEKDNIEKGIKEAIFQHNIRCLVMGAAADRHKTGLDSEDTPGIETTPVLLMLDSNTEAKQSEKIKSELIPNVLKYLDSSDMEETENIIARTKLTELVIHEDDEALQNWRAKEISRRKEVEKQLARKKQDVLEMKNQRDKIIYELQMVRDQSSALRNQLFESNCTATELEEKFLSAVDLLISFKEKRDKLRIEHANAVRKVKVLTKIGEADTTSSYVVEFPTFSFMEINEATHDFDQSWKIGEGRYGCVYKGLLRNMLVAIKMLPSYGCQSQLEFQLQVEVLSRVRHPNLLTLIGSCAESKSLVYEYLNNGSLESHLACKNKTPLPWQIRISIATDICSTLIFLHSSEPCIVHGNLKPSKVLLDANFVAKLGDLGIPYLVQHSVDSADSSPVICNNSHENLAYVDPEYLDTGKLTPESDVYSFGIILLQLLTGRPLSGLVRDMRCALEKENLKTVLDSSAGEWPLYQTTQLAYLALRCCEKTWLNRPDLVSEVWSVLKPFRTICIDRRQELTSKKLQRAPSHFVCPIVQEVMEDPYIAADGFTYEEEAIRGWLDSGHDTSPMTNLTLEHTDLVPNYALHNAIREWQQQ* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0765 698 Pfam Protein tyrosine and serine/threonine kinase 350 599 IPR001245 GO:0004672|GO:0006468
Tpr1g0765 698 CDD RING-Ubox_WDSUB1_like 633 674 - -
Tpr1g0765 698 SMART Ubox_2 632 695 IPR003613 GO:0004842|GO:0016567
Tpr1g0765 698 SUPERFAMILY Protein kinase-like (PK-like) 321 599 IPR011009 -
Tpr1g0765 698 ProSitePatterns Protein kinases ATP-binding region signature. 351 372 IPR017441 GO:0005524
Tpr1g0765 698 SUPERFAMILY RING/U-box 626 698 - -
Tpr1g0765 698 Gene3D Phosphorylase Kinase; domain 1 315 417 - -
Tpr1g0765 698 ProSiteProfiles Protein kinase domain profile. 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0765 698 ProSiteProfiles U-box domain profile. 628 698 IPR003613 GO:0004842|GO:0016567
Tpr1g0765 698 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 165 697 - -
Tpr1g0765 698 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 17 144 - -
Tpr1g0765 698 Pfam U-box domain 629 697 IPR003613 GO:0004842|GO:0016567
Tpr1g0765 698 PANTHER OS02G0152300 PROTEIN 17 144 - -
Tpr1g0765 698 PANTHER OS02G0152300 PROTEIN 165 697 - -
Tpr1g0765 698 Gene3D Transferase(Phosphotransferase) domain 1 418 613 - -
Tpr1g0765 698 Gene3D HUPs 12 139 IPR014729 -
Tpr1g0765 698 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 628 698 IPR013083 -
Tpr1g0765 698 Coils Coil 220 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0765 Tpr-Chr1 6458861 6465703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0765 247 698 U-box Gene Family AT3G49060 51.509 7.51e-160 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr1g0765 PK_Tyr_Ser-Thr 2.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0765 - - mtr:MTR_1g100820 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0765 1 6458861 6465703 Tpr1g0765 1 6458861 6465703 ECH