Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0762 ATGGCTCCTAAACAACCAAGTACGGGTCTTTTCGTCGGATTGAACAAGGGTCATATTGTTACCAAGAAGGAATTGGCTCCTCGTCCCTCAGATCGCAAAGGGAAAACTAGCAAAAGAGTGATCTTTGTGAAGAATCTCATTAGAGAGGTTGCTGGTTTTGCACCTTACGAGAAGCGTATCACTGAGTTGCTCAAGGTTGGAAAAGACAAGAGGGCTTTGAAGGTCGCAAAGAGAAAGCTTGGAACACACAAGCGCGCCAAGAAGAAGAGAGAGGAGATGTCCAATGTTCTCAGGAAGATGAGGGCTGGTGGTGGTGCAGGAGACAAAAAGAAATAG 336 0.4613 MAPKQPSTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVIFVKNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGAGDKKK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0762 111 MobiDBLite consensus disorder prediction 87 111 - -
Tpr1g0762 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Tpr1g0762 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Tpr1g0762 111 Gene3D 60S ribosomal protein L36 1 105 IPR038097 -
Tpr1g0762 111 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Tpr1g0762 111 MobiDBLite consensus disorder prediction 79 111 - -
Tpr1g0762 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0762 Tpr-Chr1 6436442 6438079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0762 1 111 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.180 7.92e-60 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0762 K02920 - zju:107414508 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0762 1 6436442 6438079 Tpr1g0762 1 6436442 6438079 ECH