Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0761 ATGCCAGAATCTGAGGAAGAAAATCAAGACTTTCCTCCCAAGACAAAAACATCCTTAGAGGAACATGTTTGTGCTATGGATTTTGATCTTGATTTAGAAACTTCATGGCCTTTGGATCACATGTCCTTTATCTCAAATCCCATGTCACCTTTTCTGTTTTCCACTATCTCTGATCAACCTTCATCTCCTTTATGGAATTTTACTGATGGAGAAGATGAAAATCATAACAAGCTTGCAGCTTCAGCTTTCTCTGATTGCCACAAAATCTTCTCTTGTGATTCAAATTCAATAACTGAGAAGCCGGTGGAGAAAGATGACAACAAAACACTTTTGCCACCCCTTTTGCCACCAATAGAACATTTGGATAGATATTGTGGAATCAAGGAAAAGATGACACAAGCGCTTCGCTACTTCAAAGAATTGACTGAAATGAATGTTCTGGCTCAGGTTTGGGCACCTGTGAGGAATGGTAATCGGTTTGTACTTACAACTTCAGGCCAGCCTTTTATGCTAGATCCGCATAGTAACGGACTCAATCAGTATAGAACGGTCTCCCTGATGTATAAGTTTTCTGTGGATGGAGAGAATGATGGAACTCTTGGACTTCCTGGTCGAGTTTTTCAGCAGAAACTCCCAGAATGGTCTCCTAATGTTTTGTACTATTCTAGTAAAGAGTATCCCCGCCGAGATCATGCTCAACATTACAACGTTCGGGGAACCTTGGCTTTGCCTGTATTTGAACCGTCGTTGCCGTCATGTATCGGTGTGCTAGAGTTGATAATGACTTCGCCAAAGATTAACTATGCTCCCGAGGTTGAAAAAATCTGCAAAGCACTTGAGGCAGTAAATTTGAGGAGTTCAGAAATTTTGGATCATCCATTCACTCAGATTTGCAATGAAGGGCGTCAGAATGCATTATCCGAGATCTTGGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTAGCCCAAACATGGGTTCCATGTAGGCATAGGAGTGTTTTGGCTCATGGTGGTGGTTTCAAGAAAAGTTGTTCGAGTTTTGATGGTAGTTGCATGGGGCAAGTTTGCATGTCAACAACCGAGGTAGCATCCTACATCATAGATGCTCATTTATGGGGTTTCAGGGAGGCCTGTGTCGAGCATCACTTACAACATGGTCAAGGTGTTGCGGGGAGGGCTTTTTTGTCTCAAAACATGAGCTTCTGCTCTAACATTACACAATTCTGCAAAACAGATTACCCTTTGGTTCATTATGCTCTCATGTTTGGGTTAACAGGCTGTTTTGCGATCTGTTTGCGGAGTTTTTATACAGGAGATGATGATTATGTGTTAGAGTTTTTTCTGCCTCCTGGGATCACAGAATTTCATGAACAGAAGACGCTCTTGGGATCCATATTGGCAACATTGAAAGAACATTTTCAGAGTCTTAAGATTGCTGCTGGCGTTGAACTTGAGGAAAATGGTTCAATTGAAATTATTGAAGCAACAGATGAAGGCATTCGTCTTAGAACTGAATCTATTCCAATTGCTCAATCTATTAAATCACCATTTATACCTGATGCCTCACCAAATATGGAGGAGGTACCACAGGATGATCCATCAGGGATTCATGGTGAAGACATAGGTGGAAGCATCAATCCAATGTCCCCATTAGGAAACAAAAACATAAAGAAACCCTCAGAGAGGAAACGTGGAAAAACGGAGAAATCAATTAGTCTTGAAGTTCTACAACGGTATTTCGCCGGGAGTCTTAAAGATGCTGCAAAAAGCCTCGGCGTTTGCCCTACTACAATGAAGCGCATATGCAGGCAGCATGGGATATCCCGTTGGCCATCTCGAAAGATCAACAAGGTTAACCGTTCCCTGTCCAAGCTCAAGCGTGTTATTGAATCTGTCCAAGGTGCTGAAGGAGCGTTTGATTTGAATTCCCTCAGTAATAATCAACTTCCAATTGTTAGTTCTTTTCCTGAGCCTTCTACTCCGAATAAGTCCAACCAGCAAGGCTCATTAAACATCAAGCCATCAGAGCCTCAGATGAAAGAGAATGAGTTTGACGCCTCTAAAGTATCAGAAACAAACATACAAGCTGTAATGGAAGATCAATTACTAGGAGGAAGGAAACATAGTCTTGATAAAGAAGTGATTAATGATAAAGGTGTGTCTATTCGGGAAATTGGGAACGACCGAAAAAGGACTAGAACTAGGAGTGGCTCGAGCGAAGATAGCACAAATCCTGCTTCTCATGGTTCATGCCATGGTAGTCCACCAAATGAAATTTCAACTGTAAAAGATCTATTCAATCCATCCAACAATGAGCAATGTATTGTGTTGAGGGGATCACCAGAGTCGAGAGTGCAGCCAACTAATGCATTCAACTCTCCAACTGCTCACTGTTTGCCTGACAACGTGCTAGCAGAACTTCAAGAGCCATTCGGAGGAATGCTAATAGAGGACGCTGGAAGTTCGAAAGACTTGAGAAATTTGTGTCCTTCGGTAGCTGAGGCCATTTTGGAGGATATGGCTCCAGAAGCTTGTGGAACTAATCTTCCAGGTTCATATATGGCTCCTCCTAAACAATGCATGGATACTATTAATAATAATAATTCAGTGATGCCTTTCGCAGTTAGAAAAGAAATGAAAACCGTGACTATTAAGGCAACATATAGAGAAGATATCATAAGATTTAGGGTCTCTTTGAACTGTGGCATTGTGGAATTGAAAGAAGAAGTTTCCAAAAGATTGAAACTAGAGGTTGGTACATTTGATATCAAGTACATGGATGATGATAATGAATGGGTTTTGATAGCATGTGATGCAGATCTTCAGGAGTGCATGTTTGTTTCAAGATCATCCGGAGGAAGCAACATAATCCGGGTTTTGGTGCATGACATAACGTCGAATCTTGGAAGCTCTTGTGAGAGCTCAGGGGAGTGA 2943 0.4152 MPESEEENQDFPPKTKTSLEEHVCAMDFDLDLETSWPLDHMSFISNPMSPFLFSTISDQPSSPLWNFTDGEDENHNKLAASAFSDCHKIFSCDSNSITEKPVEKDDNKTLLPPLLPPIEHLDRYCGIKEKMTQALRYFKELTEMNVLAQVWAPVRNGNRFVLTTSGQPFMLDPHSNGLNQYRTVSLMYKFSVDGENDGTLGLPGRVFQQKLPEWSPNVLYYSSKEYPRRDHAQHYNVRGTLALPVFEPSLPSCIGVLELIMTSPKINYAPEVEKICKALEAVNLRSSEILDHPFTQICNEGRQNALSEILEILTVVCETHNLPLAQTWVPCRHRSVLAHGGGFKKSCSSFDGSCMGQVCMSTTEVASYIIDAHLWGFREACVEHHLQHGQGVAGRAFLSQNMSFCSNITQFCKTDYPLVHYALMFGLTGCFAICLRSFYTGDDDYVLEFFLPPGITEFHEQKTLLGSILATLKEHFQSLKIAAGVELEENGSIEIIEATDEGIRLRTESIPIAQSIKSPFIPDASPNMEEVPQDDPSGIHGEDIGGSINPMSPLGNKNIKKPSERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFDLNSLSNNQLPIVSSFPEPSTPNKSNQQGSLNIKPSEPQMKENEFDASKVSETNIQAVMEDQLLGGRKHSLDKEVINDKGVSIREIGNDRKRTRTRSGSSEDSTNPASHGSCHGSPPNEISTVKDLFNPSNNEQCIVLRGSPESRVQPTNAFNSPTAHCLPDNVLAELQEPFGGMLIEDAGSSKDLRNLCPSVAEAILEDMAPEACGTNLPGSYMAPPKQCMDTINNNNSVMPFAVRKEMKTVTIKATYREDIIRFRVSLNCGIVELKEEVSKRLKLEVGTFDIKYMDDDNEWVLIACDADLQECMFVSRSSGGSNIIRVLVHDITSNLGSSCESSGE* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0761 980 Pfam RWP-RK domain 573 621 IPR003035 -
Tpr1g0761 980 MobiDBLite consensus disorder prediction 724 758 - -
Tpr1g0761 980 SMART PB1_new 884 967 IPR000270 GO:0005515
Tpr1g0761 980 ProSiteProfiles RWP-RK domain profile. 560 641 IPR003035 -
Tpr1g0761 980 SUPERFAMILY CAD & PB1 domains 882 970 - -
Tpr1g0761 980 MobiDBLite consensus disorder prediction 659 679 - -
Tpr1g0761 980 Gene3D - 881 964 - -
Tpr1g0761 980 MobiDBLite consensus disorder prediction 724 740 - -
Tpr1g0761 980 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 3 979 - -
Tpr1g0761 980 MobiDBLite consensus disorder prediction 741 758 - -
Tpr1g0761 980 ProSiteProfiles PB1 domain profile. 884 967 IPR000270 GO:0005515
Tpr1g0761 980 PANTHER PROTEIN NLP8 3 979 IPR045012 GO:0003700
Tpr1g0761 980 CDD PB1_NLP 885 966 IPR034891 -
Tpr1g0761 980 Pfam PB1 domain 884 966 IPR000270 GO:0005515
Tpr1g0761 980 MobiDBLite consensus disorder prediction 659 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0761 Tpr-Chr1 6429242 6434590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0761 261 980 NLP Transcription Factor Family AT4G24020 53.576 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tpr1g0761 PB1 2.2e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0761 - - gmx:100786118 1518.06