Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0758 ATGATTCCGTTCATATATCTGAAGAAGAAGACGAAGTTTGTTGTGGCTTTGGCATTATTGTGTATAATCACGGTGGAGCCATGGCGTGTTAACTCAGCAGAACAAAGGCTTCTGGTGAACATGACGCTCGTTGCCAACGCACGTGATACTGGTGCTCTTTGTTTGGATGGAAGTTTACCGGCCTATCATTTGGATAGGGGATATGGAGCGGGTCAAAACAATTGGCTTCTACAATTTGAGGGAGGTGGGTGGTGCAATGACTTGCCATCATGCTTGGAAAGAGCACAAACTCGCAGGGGTTCTACACGTTACATGACCAAATTGGAGGTCTTTTCTGGTATATTAAGCAACAATGCCACCCTTAATCCAGACTTTTATAATTGGAATAGGGTGAAGCTGAGATACTGTGATGGAGCTTCATTTACTGGAAACAGAGTGTTCAATAATGGGACAACAAAGCTTTACTTTAAAGGGCAAAAGATTTGGGAAGCCATTATTGGCGACCTTCTACCCAAAGGTTTAGGAAAGGCACACAAGGCTTTGCTTTCAGGCTGTTCAGCAGGAGGTTTAGCCACCTTTCATCATTGTGACAACTTCACCAAGTATTTGCCAATTAATGCTAGTGTTAAATGCTTGAGTGACGCAGGTTTTTTCCTTGATGGAAGAGATGTCAGTTTGAACCACACTATGAGATACTTTGTCAAAAGTCTAGTTACATTGCAGGGGATTGAACAAAATCTTAATAAAAACTGCACCAGTGCGTTGTCCTATCCAGACTTGTGCTTCTTTCCACAATATGCGTTGAAATATATATCAACACCATATTTTATCTTGAACTCAGCCTATGATGTATTCCAATTCCATCATATATTGGTGCCACCTTCAGCTGATCCCCGCGGGCACTGGAACCACTGTAAGGTGAACCCAGCGGCATGCACACCAGACCAAATTGATACATTGCAAGGGTTTAGGCTCAGCATGACTGCAGCTTTGAAACCCTTCTACTTTTATTCAAGTAGAGGGGGGATGTTCATAAATTCATGTTTTGCTCACTGCCAAAGTGAATCGCAAGAAACATGGTTTGGAGCTGATTCTCCAAGAATAAACGACAAGACTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGAAACAGAAGCAAGGCAATAGACTGTGCATATCCATGTGATAAAACTTGTCATAATTTGATACCATATATAAACTCAGGTCATTTGGAAGAGGATACTGGAAATTTATCAACAAGCTTTCCGGTTCTCCTATCCGAGTTCTCTGAAAAAAGGATCTAG 1308 0.4174 MIPFIYLKKKTKFVVALALLCIITVEPWRVNSAEQRLLVNMTLVANARDTGALCLDGSLPAYHLDRGYGAGQNNWLLQFEGGGWCNDLPSCLERAQTRRGSTRYMTKLEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGNRVFNNGTTKLYFKGQKIWEAIIGDLLPKGLGKAHKALLSGCSAGGLATFHHCDNFTKYLPINASVKCLSDAGFFLDGRDVSLNHTMRYFVKSLVTLQGIEQNLNKNCTSALSYPDLCFFPQYALKYISTPYFILNSAYDVFQFHHILVPPSADPRGHWNHCKVNPAACTPDQIDTLQGFRLSMTAALKPFYFYSSRGGMFINSCFAHCQSESQETWFGADSPRINDKTIAEAVGDWYFSRNRSKAIDCAYPCDKTCHNLIPYINSGHLEEDTGNLSTSFPVLLSEFSEKRI* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0758 435 PANTHER PECTIN ACETYLESTERASE 9 32 405 - -
Tpr1g0758 435 Pfam Pectinacetylesterase 33 385 IPR004963 GO:0016787
Tpr1g0758 435 PANTHER NOTUM-RELATED 32 405 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0758 Tpr-Chr1 6407954 6415362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0758 7 412 Carbohydrate Esterase AT5G23870 66.180 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0758 K19882 - gmx:100802358 693.345