Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0757 ATGATTCCATTGTTTTCTCTTAGGATGAACTTCGCGGCCATGGCTGTGGCATTATTGTATCTAACCACAGTGGAGCCGTGGCGCGTTAATTCAAAAACGGTGAACATAAAGCTCGTTACAAATGCACGTGAAACTAGTGCTCTTTGTTTGGATGGGAGTTTACCGGGGTATCATTTGGACAGAGGATATGGAGCGGGTCAAAACAATTGGCTTCTACAATTCGAGGGTGGTGGATGGTGCAATGACCTAACATCATGCTTAGAGAGAGCACAAACTCGCAGGGGTTCATCACATTATATGAGTAAGTTGGCGACCTTCAATGGTATTTTAAGCAACAATGCTACCCTTAATCCAGATTTTTATAATTGGAATAGGGTGAAGCTTAGATACTGTGATGGAGCTTCATTTACTGGAAACAAAGTGTTGAATAATGGGACAACAAAGCTTTACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCAGGACCTTCTACCACAAGGTTTAGAAAAGGCACAGAAGGCTTTGCTTTCAGGCTGTTCAGCAGGAGGTTTAGCCACTTTTCACCATTGTGACAACTTTACCAAATATTTGCCAGCAAATGCTAGTGTTAAATGCATGAGTGATGCAGGGTTTTTTCTTGATGAAAAAGATATCAGTTTGAACTACACCATGAGGAACTTCTTCAAAGGTGTAGTTACATTGCAGGGTGTAGAGCAGAATCTAAATAGTAAGTGTACCAAAGGGTTCTCCTCCAATGCATTCTTGTGCTTCTTTCCACAGTATGCGTTGAAATATATATCGACACCATATTTTATCTTAAACACTGCCTATGATGTATTCCAATTCAGTAATGTATTGGTGACACCTTCATCCGATCCCCAAGGAAAATGGAACCAGTGCAAGCATAAACTATCGACATGCACCCCAGCCGAAATTGATACATTGCAAGGTTTTAGGCTCAGCATGATTACAGTTTTGAAACCGTTCTTAGATTCAAAAAGCAGCGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAAATGCAAGAAACATGGTTTAAAGCCAATTCTCCAAGAATAAACAATAAGACTATTGCAAAAGCAGTTGGTGATTGGTATTTTGGTAGAAGCAAAACTCAGGAAATAGACTGTGCATATCCATGTGACAAAACTTGCCATAATATGATACCATAA 1203 0.3965 MIPLFSLRMNFAAMAVALLYLTTVEPWRVNSKTVNIKLVTNARETSALCLDGSLPGYHLDRGYGAGQNNWLLQFEGGGWCNDLTSCLERAQTRRGSSHYMSKLATFNGILSNNATLNPDFYNWNRVKLRYCDGASFTGNKVLNNGTTKLYFKGQKIWEAIIQDLLPQGLEKAQKALLSGCSAGGLATFHHCDNFTKYLPANASVKCMSDAGFFLDEKDISLNYTMRNFFKGVVTLQGVEQNLNSKCTKGFSSNAFLCFFPQYALKYISTPYFILNTAYDVFQFSNVLVTPSSDPQGKWNQCKHKLSTCTPAEIDTLQGFRLSMITVLKPFLDSKSSGMFINSCFAHCQSEMQETWFKANSPRINNKTIAKAVGDWYFGRSKTQEIDCAYPCDKTCHNMIP* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0757 400 Pfam Pectinacetylesterase 30 381 IPR004963 GO:0016787
Tpr1g0757 400 PANTHER PECTIN ACETYLESTERASE 9 30 400 - -
Tpr1g0757 400 PANTHER NOTUM-RELATED 30 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0757 Tpr-Chr1 6401391 6405620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0757 9 400 Carbohydrate Esterase AT5G23870 61.364 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0757 K19882 - gmx:100794453 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0757 1 6401391 6405620 Tpr1g0757 1 6401391 6405620 ECH