Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0717 ATGGGGTTTGAGAGTGTGAACAGTTCCTGTAAGGTTGCAAGACTTGTCACTGATATTTCTATACCCTTTTCCAGTTCAATGCAAAATTCTTCTACCTTTTTCTCAACTCAAAAAAAAATGGAGGGTCAGAGTGAGATTGGTCTCACTAGTGAAAGTTTAGATACTAGTATGATAGGGAGAATGAGGGAGGATGAGTATGAAAGCCGGTCCGGAAGCGATAACTTTGATCTTGAAGGAATATCTGGTGATGACCAGGATGGTGATGATGGTCAGCGCAAGAGGAAGAAGAGATACCATAGACATACTCCTAATCAAATTCAAGAGCTTGAATCTTTCTTCAAAGAGTGTCCTCATCCTGATGAAAAGCAAAGGTTGGATCTTAGTAAGAGACTTGGCTTGGAAAATAAACAAGTCAAGTTCTGGTTTCAGAATCGTCGAACCCAAATGAAGACTCAGCTGGAAAGACACGAGAACATAATGCTTAGGCAAGAAAATGATAAGCTAAGAGGGGAGAATAGTATGATGAAAGAAGCAATGGTGAATCCAATTTGTAACAACTGTGGTGGACCAGCAATTCCTGGCCAAATTTTGTTTGAAGAGCACCAGATTAGAATTGAAAATGCTCGTCTAAAAGACGAATTGAACCGTATATGTGCCTTAACAAACAAGTTCCTCGGCAAACCAATATCGTCATTGGCTAATCCCATGGCTCTACCAACCTCAAATTCTGGTCTTGAACTTGGTATTGGAAGGAATGGTTTTGGTGGTGGTTCAAGCTCTCATGGCACTTCTTTACCAATGGGACTTGATCTTGGAGATGGTCCTGCGATGCATGGTATTAGGTCGCCAATGGGATTGATGGGAAATAGTAATGATGTTCAGCTCGAGAGATCGGTGCTTATAGATCTTGCATTGGCTGCTATGGATGAATTATTAAAGATGGCTCAGACAGATAATCCTATTTGGATTAAGGGATTGGATGGAGAAAGGGACATATTAAATCATGAAGAGTATGCAAGGTCATTTTCTTCTTGTATTGGTCCAAAACCCACTGGTTTTGTCTCTGAAGCTACCAGAGAAACTGGCATAGTAATAATCAACAGTTTAGCTCTGATGGAAACTTTGATGGATGCGAATCGGTACGCAGATATGTTTCAGTCGATGATTGCTAGATCAGTCAACCTTGATGTTTTATCGGGTGGCATCGGTGGAACAAGAAATGGTGCTATACATTTGATGCATGCTGAGGTTCAATTGCTTTCACCACTAGTCCCGGTTCGTCAAGTGAAAATCCTTCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTCGATGTTTCTGTTGAGATCGGTCACGATGCTGCTAATGCGCAACCTTTCATTAGCTGTAGAAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCAAATGGTTACTCCAAGGTCACTTGGATTGAGCATTGGGAGTATGATGAGAGTGTTGTCCACAACCTTTATCGTCCGTTGATAATATCTGGTTCTGGATTCGGCGCTCATAGATGGATCGCCACCCTCCAAAGGCAGTGTGAAGGCTTGGCTATCCTCATGTCCTCTTCCATCTCAAGTGATGATCACACCGCATTGAGCCAAGCTGGTAGAAGAAGCATGTTGAAGCTGGCACAACGCATGACCAACAACTTCTGTTCTGGTGTTTGTGCTTCATCTGCTAGAAAATGGGACAGCCTTCAAATGGGGACCTTGAGTGATGACATGAGAGTTATGACTAGGAAAAATGTTGATGACCCCGGCGAGCCTCCCGGTATTGTGCTCAGCGCTGCTACATCTGTTTGGATGCCAGTTTCACGGCAAAGGCTGTTTGATTTTCTGCGTGATGAACGGCTTAGAAGCGAGTGGGACATTTTGTCTAATGGCGGACCAATGCAAGAGATGGTTCACATTGCAAAAGGACAAGGACAAGGAAATTGTGTTTCTCTCCTCCGTGCTAATGCCGTTAATGCGAACGATAGCAGCATGTTGATTCTGCAAGAGACATGGATGGATACATCGTGTTCCGTCGTGGTGTACGCACCTGTTGACGGGCAATCATTGAACGTGGTGATGAGTGGCGGAGATTCTGCATACGTGGCACTCTTGCCTTCAGGCTTTGCTATTGTTCCTGATGGCAATAACTCCTCTGGCTATGGTGCATCAAATGGAACTTTACAGAAAGGCAACGGCAGCGATGATGGTGGAAGTTTGCTCACAGTTGGATTCCAAATTCTGGTGAATAGTCTTCCATCTGCTAAGCTTACAATGGAGTCAGTTGATACAGTTAACAATCTCATCTCATGCACCATTCAGAAGATCAAAGCTGCACTTAGAGTTGCATAA 2376 0.4377 MGFESVNSSCKVARLVTDISIPFSSSMQNSSTFFSTQKKMEGQSEIGLTSESLDTSMIGRMREDEYESRSGSDNFDLEGISGDDQDGDDGQRKRKKRYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRGENSMMKEAMVNPICNNCGGPAIPGQILFEEHQIRIENARLKDELNRICALTNKFLGKPISSLANPMALPTSNSGLELGIGRNGFGGGSSSHGTSLPMGLDLGDGPAMHGIRSPMGLMGNSNDVQLERSVLIDLALAAMDELLKMAQTDNPIWIKGLDGERDILNHEEYARSFSSCIGPKPTGFVSEATRETGIVIINSLALMETLMDANRYADMFQSMIARSVNLDVLSGGIGGTRNGAIHLMHAEVQLLSPLVPVRQVKILRFCKQHAEGVWAVVDVSVEIGHDAANAQPFISCRRLPSGCIVQDMPNGYSKVTWIEHWEYDESVVHNLYRPLIISGSGFGAHRWIATLQRQCEGLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTNNFCSGVCASSARKWDSLQMGTLSDDMRVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGQGNCVSLLRANAVNANDSSMLILQETWMDTSCSVVVYAPVDGQSLNVVMSGGDSAYVALLPSGFAIVPDGNNSSGYGASNGTLQKGNGSDDGGSLLTVGFQILVNSLPSAKLTMESVDTVNNLISCTIQKIKAALRVA* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0717 791 ProSiteProfiles START domain profile. 293 529 IPR002913 GO:0008289
Tpr1g0717 791 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 36 789 - -
Tpr1g0717 791 Coils Coil 146 166 - -
Tpr1g0717 791 MobiDBLite consensus disorder prediction 37 56 - -
Tpr1g0717 791 SUPERFAMILY Homeodomain-like 81 152 IPR009057 -
Tpr1g0717 791 CDD START_ArGLABRA2_like 297 525 - -
Tpr1g0717 791 CDD homeodomain 94 152 IPR001356 GO:0003677
Tpr1g0717 791 SUPERFAMILY Bet v1-like 295 526 - -
Tpr1g0717 791 MobiDBLite consensus disorder prediction 57 72 - -
Tpr1g0717 791 ProSitePatterns 'Homeobox' domain signature. 127 150 IPR017970 GO:0000981|GO:0006355
Tpr1g0717 791 SMART START_1 302 526 IPR002913 GO:0008289
Tpr1g0717 791 SUPERFAMILY Bet v1-like 553 785 - -
Tpr1g0717 791 SMART HOX_1 93 156 IPR001356 GO:0003677
Tpr1g0717 791 MobiDBLite consensus disorder prediction 37 104 - -
Tpr1g0717 791 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 36 789 IPR042160 -
Tpr1g0717 791 Gene3D - 82 167 - -
Tpr1g0717 791 Pfam Homeodomain 95 150 IPR001356 GO:0003677
Tpr1g0717 791 Pfam START domain 303 525 IPR002913 GO:0008289
Tpr1g0717 791 ProSiteProfiles 'Homeobox' domain profile. 92 152 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0717 Tpr-Chr1 6072669 6078600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0717 1 788 Homeobox Transcription Factor Family AT3G61150 58.068 0.0 913
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr1g0717 START 2.7e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0717 K09338 - gmx:100785102 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0717 1 6072669 6078600 Tpr2g4351 2 47297967 47301165 ECH
Tpr2g1455 2 17133818 17140372 Tpr1g0717 1 6072669 6078600 ECH
Tpr1g0717 1 6072669 6078600 Tpr1g0717 1 6072669 6078600 ECH