Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0714 ATGGGATTTCTCCGGCGACTCTTTGGCGCCAAAAAACCGGCTCCTCCCTCTAATGGGTCGGGTACCAAGCCTAACAAAGACACTAATAAGAAAAAATGGAGCTTTGCCAAACAAAGTGGCAGAAGAAGGTCACTCCCGCCACCTCCGCCGCCGCAACCAACTGATTTCATCCAATTTGACTCCTCAACTTCCTTAGAACGCAACAAACATGCAATTGCTGTTGCTGCAGCTACAGCAGCAGTAGCCGAGGCTGCTCTAACCGCTGCTCGTGCTGCTGCTGAGGTGGTTAGACTGACAAGCAACGGTGTCGGTGGAAGTAGTGCCGTAAGCAGACCCAGAGTGCGTGTTGACCATCCACGGTTGCCGGTGGAGACCGCCGCTGTTAAAATACAGTCAGCTTTCCGCGGTTATTTGGCTAGGAGGGCGTTGAGAGCACTTAAATCATTGGTAAAGTTGCAAGCATTAGTTAGAGGGCACATAGTGAGAAAACAAAGTGCAGATATGCTTAGGCGTATGCAAACATTAGTGAGACTGCAGACACAGGCACGTGCAAGTCGTGCCCACTTATCAACATCAGATAATTTGCATTCTTTTAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGAATATGAGCATTCACATCCTGTCTACACTACAAAATTCGGTGGATCTTCCATGCTCAAGAGATGCAGTTCCAATGCAAATGTTAGGAAGATTGAGTCAGAAAAACCACGTTATGGTCCCAATTGGTTAGACCATTGGATGCAAGATAACTCATGTAACAAAATAAAAAACACTTCATCAAAGAATCGACAAGCCGATAATAAAAAATGCGACAAGATTCTCGAAGTAGATACTTGGAAGCCACATGATTCACCATCAAAATATTCAACAAAACCTCAAAATCAAAGTCTCCCGCGTACCGCTGATAATAGTCCACAAACATTTTCTGCTTCTTCAAAAACTGGAAATGGTGTAAGGAGAGCTACACCCTTTACACCTACAAGGAGTGAGTGTTCATGGAGTTTCTTAGGTGGATACTCTGGTTACCCTAACTACATGGCAAATACTGAATCTTCTAAAGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGGGTTGAGTTTGAGAGATGCAGTTCAACTAGAAAACCTTTTAAGGGATTTTGGGATGTGGGGCCTACTAATTCAGACCAAGATTCTGAATATGAATATTCAAGGAGTCACAAAGTCTCACCTGCTTTGAGTCGTTTTAATAGAATTGGAAGTAGTAATAATTTAAGGTGA 1290 0.4364 MGFLRRLFGAKKPAPPSNGSGTKPNKDTNKKKWSFAKQSGRRRSLPPPPPPQPTDFIQFDSSTSLERNKHAIAVAAATAAVAEAALTAARAAAEVVRLTSNGVGGSSAVSRPRVRVDHPRLPVETAAVKIQSAFRGYLARRALRALKSLVKLQALVRGHIVRKQSADMLRRMQTLVRLQTQARASRAHLSTSDNLHSFKSSLSHYPVPEEYEHSHPVYTTKFGGSSMLKRCSSNANVRKIESEKPRYGPNWLDHWMQDNSCNKIKNTSSKNRQADNKKCDKILEVDTWKPHDSPSKYSTKPQNQSLPRTADNSPQTFSASSKTGNGVRRATPFTPTRSECSWSFLGGYSGYPNYMANTESSKAKVRSQSAPRQRVEFERCSSTRKPFKGFWDVGPTNSDQDSEYEYSRSHKVSPALSRFNRIGSSNNLR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0714 429 PANTHER IQ-DOMAIN 5-RELATED 306 426 - -
Tpr1g0714 429 PANTHER IQ-DOMAIN 5-RELATED 1 300 - -
Tpr1g0714 429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 168 IPR027417 -
Tpr1g0714 429 MobiDBLite consensus disorder prediction 294 332 - -
Tpr1g0714 429 SMART iq_5 122 144 IPR000048 GO:0005515
Tpr1g0714 429 SMART iq_5 145 166 IPR000048 GO:0005515
Tpr1g0714 429 PANTHER CALMODULIN-BINDING PROTEIN 306 426 - -
Tpr1g0714 429 PANTHER CALMODULIN-BINDING PROTEIN 1 300 - -
Tpr1g0714 429 MobiDBLite consensus disorder prediction 391 411 - -
Tpr1g0714 429 Gene3D - 122 176 - -
Tpr1g0714 429 MobiDBLite consensus disorder prediction 1 53 - -
Tpr1g0714 429 Pfam Protein of unknown function (DUF4005) 313 376 IPR025064 -
Tpr1g0714 429 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Tpr1g0714 429 MobiDBLite consensus disorder prediction 290 332 - -
Tpr1g0714 429 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Tpr1g0714 429 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Tpr1g0714 429 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0714 Tpr-Chr1 6048958 6054655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0714 1 376 IQD Protein Family AT5G62070 48.346 1.61e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0714 - - gmx:100783694 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0714 1 6048958 6054655 Tpr1g0714 1 6048958 6054655 ECH