Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0713 ATGGATGGTGATCGTAACAAGTTAGGTAATGTGCATGAAGAAAATGTTGATGTTGGACCTGAAACATCGAATAATTTGGACTTGAATGTGGAGCAAAACAGTTCCAGCCCAAATGTTGTTCATGCTAATGGCTCTCAATCTGGTGTCGCATCAGTAAATGTAGTCTGCAGCAATGCAATATTGGGAATTGGTACCGTATTTGAGTCTGATGAACATGCATACAAATTCTATAACAAGTATGCCAGATTAATGGGTTTCAATGTTAGAAAAGATTGGGTAAATAGGAGTAAGGTACATGGTATGGTGGTTTCTAGGAAATTTACCTGCTCGAAAGAGGGATACCGTAGGAAAGACAAGAGAGATGATAATGTGAAGAAACATCGGAAGGAGACGAGAACTGGCTGTTTGGCACACATGATCATCACTCGTCAACCAGACGGGAAATACCAGGTCACTCATTTTGAAGGACAACATAATCATGATGATATAAACTCGATCAATTCTAACATGTTATTACTAGAGTTGCAAAATGAAATTAATGTTGCTCAAGCTGTGGAGGTTGACTCTAATAATAATTTGGAACCCAAATCTAGGTCAGCATTAAGTATGGTGAATAAAAAATTAGATGCACGTGATTCTCTTGATCAACTGTCCATGAATTATGACAACTACCTTCATTCTGTAAGGGAAAGAGATATAAGTAAAGGAGAAGCGGGGCGTTTGCTTGGTTATTTTCAAAGGCAACACTTTGAAAATCCAACATTTTTTCATGCCATACAGCTTGATGTTGATGACAAGGTAACAAATGTATTTTGGGCTGATGACAATATGGTGGCTGATTACGACCATTTTGGGGATGTTGTTTGTTTAGATACAACTTGCAGAACAAACAGAGTTATGCGGCCATTTGTACAGTTTTTAGGTGTTAATCATCACAAACAAGTATTAATATTTGCTGCTGCTTTTTTGTATGATGAGACCATTGAATCATTTAATTGGTTATTTCGAACATTCATCGGCGCAATGTCTGGGAAAAAGCCAAAGGCCATTATAACAGAACAAGATGCTACAATCATTGAAGCAGTCAATACGGTTTTACCTGAAACAAACCGGTATACATGTGTATGGCAGATGTATGAGAATACTCTGAAACACCTCAGCTATTTTGTTAAAGATGCTGAATCATTTGCAAATGATCTAAGGAGTTGTATATATGACCCCAAGGATGAGGAAGAATTTGCCCATGCTTGGGAGGCTATGCTGCAGAAGTATAACCTCCAGCAAAATGAATGGTTGAGATGGATGTATAGAGAAAGGGAGAAATTGGCTGTTTTCTTTGGTCAGAATACCTTTTTTGTAGATGTCAAAGGCTTTCATTTAGGTGAGGTTTTGTCTCGTAAGCTTAGAAGTTATCTAAATCCTGACCTTGATGTAGTTCAATTTTGTAACCATTTTGAAAGGGTGGTAGATGAGCAACGCTATAAAGAAATAGAAGCTGATGATGAGATGAAGGGATGTTTTCCAAAGTTAATGGGTAATGTGGTTATGTTGAAACATGCAAGTGTTGCTTATACTCCAAGAGCATTTGAAGTATTTCAGCAAAGATATGAGAAATCTTTGAATGTTCTTGTCAACCAGCACAACGTAGATGGATCTTTGTTTGAGTATAAAGTGAATACATTTGGCCAGGCTAGACAATACAGTGTCACCTTCAATTCTTTAGATGATACAGTTGTCTGCAGTTGTATGAAGTTTGAACATGTTGGTTTTCTGTGTAGCCATGCACTAAAAGTTCTTGATTATAGAAACATAAAAGTAGTTCCATCTCGTTACATCTTGGAGAGATGGACAAAAGATGCAAGGTTGGCAAATATCAGGGAGATTAAACACTGTAAAATGCAAGATAACCCTAAGTTGGTTGTAGCAAGCTGTTACAAAGATTTGTGCCACAGACTTGTCAAGTTATCAGCAAGAGCTTCTGAATCCGTGGAAGCTTATCAATTTGCCGTGAGGCAGCTTGATGAAGTGATGGAAGGAGTGCAGAAAATCTTGATTTTGAAAGGTGAGGAAGAAGATGCTTCAGAAAGTGCGCCTGCAGAGATCTTTCGGAATGGACATGCAACTGAGGATCAGGATGTAAGTAACAGAGTAAGTGGAGAAATTGACAGGAGCGCTACACAGGATATTGCCCAAACAACGGTGAATTATAATCAAACGGATTCAGACAGGATTTTAAATGCAGAAGTACATCCTCCAAATACCGTTGTCTGCATATCAAGCCCCTCATCTCCATATGTTTCATCTCAATCCGTGACACCAAATTCCCTTTTGCAGGGCTTATTTGGTTTTGAAGCCAATCAAGTGGTTCAATGTATGTATGAACAGCCTGATCTTGTGTTGAACCATCAATCTAATACTAACCTGTTCCAACCACCAAACTACTATTCTAATCAACAGAGTTCTCCTTGCCGATCTCACCTATCGCAGGTTCCTATCATCCAAAACACATACCATGAATCCATGCCAAGCAATAATCAGACGCGACAGGGGATGGATCTTGATATCCAAAATCCTCATTCAGAATCCTGTATCATGCTTCCGACCCTGCACAACGGATTAAAGGACCATGGTTGA 2634 0.3876 MDGDRNKLGNVHEENVDVGPETSNNLDLNVEQNSSSPNVVHANGSQSGVASVNVVCSNAILGIGTVFESDEHAYKFYNKYARLMGFNVRKDWVNRSKVHGMVVSRKFTCSKEGYRRKDKRDDNVKKHRKETRTGCLAHMIITRQPDGKYQVTHFEGQHNHDDINSINSNMLLLELQNEINVAQAVEVDSNNNLEPKSRSALSMVNKKLDARDSLDQLSMNYDNYLHSVRERDISKGEAGRLLGYFQRQHFENPTFFHAIQLDVDDKVTNVFWADDNMVADYDHFGDVVCLDTTCRTNRVMRPFVQFLGVNHHKQVLIFAAAFLYDETIESFNWLFRTFIGAMSGKKPKAIITEQDATIIEAVNTVLPETNRYTCVWQMYENTLKHLSYFVKDAESFANDLRSCIYDPKDEEEFAHAWEAMLQKYNLQQNEWLRWMYREREKLAVFFGQNTFFVDVKGFHLGEVLSRKLRSYLNPDLDVVQFCNHFERVVDEQRYKEIEADDEMKGCFPKLMGNVVMLKHASVAYTPRAFEVFQQRYEKSLNVLVNQHNVDGSLFEYKVNTFGQARQYSVTFNSLDDTVVCSCMKFEHVGFLCSHALKVLDYRNIKVVPSRYILERWTKDARLANIREIKHCKMQDNPKLVVASCYKDLCHRLVKLSARASESVEAYQFAVRQLDEVMEGVQKILILKGEEEDASESAPAEIFRNGHATEDQDVSNRVSGEIDRSATQDIAQTTVNYNQTDSDRILNAEVHPPNTVVCISSPSSPYVSSQSVTPNSLLQGLFGFEANQVVQCMYEQPDLVLNHQSNTNLFQPPNYYSNQQSSPCRSHLSQVPIIQNTYHESMPSNNQTRQGMDLDIQNPHSESCIMLPTLHNGLKDHG* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0713 877 SMART 26again6 578 605 IPR006564 GO:0008270
Tpr1g0713 877 Pfam SWIM zinc finger 580 602 IPR007527 GO:0008270
Tpr1g0713 877 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 9 746 - -
Tpr1g0713 877 MobiDBLite consensus disorder prediction 1 21 - -
Tpr1g0713 877 Pfam MULE transposase domain 287 381 IPR018289 -
Tpr1g0713 877 ProSiteProfiles Zinc finger SWIM-type profile. 567 603 IPR007527 GO:0008270
Tpr1g0713 877 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 746 IPR031052 GO:0006355
Tpr1g0713 877 Pfam FAR1 DNA-binding domain 75 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0713 Tpr-Chr1 6043473 6047357 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr1g0713 MULE 1.7e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0713 - K17604 gmx:100809803 1323.53