Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g0702 | ATGTTTACTATGAATCATATATCGGAGTCACATGTTCCATGTTCATCTTCAGAGAGGTTTCTTGCTGAAACTATGCCAAAGAAACCTGCAGGGAGGAAGAAGTTCAGGGAAACCCGCCACCCTGTATACCGTGGTGTCAGAAAGAGAGATTCCGGCAAGTGGGTTTGTGAAGTAAGAGAACCTAACAAGAAAACCAGAATTTGGCTTGGGACATTTCCTACTCCCGAGATGGCGGCGCGTGCACACGACGTTGCTGCGATTGCGCTTAGAGGAAATTCTGCTTGTCTTAACTTTGCTGACTCTACTTGGAGGTTGCCGGTTCCTGCCACAGCGGATGCAAGGGATATTCAAAAAGCGGCGGCTGAGGCAGCGGAGAAGTTCAGGCCGGAGACTGAGTTTGAGAACAGTGAGGAGAGGAAGGTTTGTGAGAGTTCAACGACGGTGGCGGTGGCGGAGCCAGAGGAAGAAGAACACACAGTGCCGGAGTATTTAAGAAACATGGTACTAATGTCACCGGCACATTATTGGGGGAGTGAATGTGAATATGATATTGCTGACGTGGAATTTGGTGGTGATACTGATACTGAAGTTTCATTGTGGAGTTTTTCAATTTAA | 615 | 0.4748 | MFTMNHISESHVPCSSSERFLAETMPKKPAGRKKFRETRHPVYRGVRKRDSGKWVCEVREPNKKTRIWLGTFPTPEMAARAHDVAAIALRGNSACLNFADSTWRLPVPATADARDIQKAAAEAAEKFRPETEFENSEERKVCESSTTVAVAEPEEEEHTVPEYLRNMVLMSPAHYWGSECEYDIADVEFGGDTDTEVSLWSFSI* | 205 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g0702 | 204 | Pfam | AP2 domain | 41 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr1g0702 | 204 | SUPERFAMILY | DNA-binding domain | 42 | 101 | IPR016177 | GO:0003677 | |
Tpr1g0702 | 204 | PANTHER | CBF/DREB1 TRANSCRIPTION FACTOR | 9 | 204 | - | - | |
Tpr1g0702 | 204 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 9 | 204 | IPR045277 | GO:0003700 | |
Tpr1g0702 | 204 | SMART | rav1_2 | 42 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr1g0702 | 204 | PRINTS | Ethylene responsive element binding protein signature | 43 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr1g0702 | 204 | PRINTS | Ethylene responsive element binding protein signature | 65 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr1g0702 | 204 | CDD | AP2 | 43 | 101 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr1g0702 | 204 | Gene3D | AP2/ERF domain | 42 | 100 | IPR036955 | GO:0003700|GO:0006355 | |
Tpr1g0702 | 204 | ProSiteProfiles | AP2/ERF domain profile. | 42 | 99 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g0702 | Tpr-Chr1 | 5952060 | 5953679 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g0702 | 8 | 202 | AP2-EREBP Transcription Factor Family | AT4G25470 | 51.643 | 1.90e-63 | 194 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Tpr1g0702 | AP2 | 2.6e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g0702 | - | K09286 | aprc:113872706 | 273.092 |