Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0693 ATGGGTAAGGATAATTGGTATTGGGGTGGAAGAAGATCCTCCACCAACAAGAGAAAACCTGCAACAGATATCCCTTCTGGTTGCATGTGTGCTGTTTTTCAAGCCTTTGATTTTCATCCCTTTAATTTTTCCATTAACCAACAACATCAACAACAACAACAAAACACTTTCAACTCTGCTTCTCCCATACAAATTACTCTCCCCAAAGGAGCTGAAGCACCAAGGAATAGCTTGGAATCAGAAGATGGTACATCCTCATCCATCTCCAAAGAAGATAATTTCAAAATCCCAAACATAAGAATCAAAACAGGTTCAGACAAAAGTTTCAATGATCTTAACTCTCCAGGAACCAAAACACCAACTTTGGTTGCAAGATTAATGGGTCTTGAACTTCTTCCTGATGCAAATTCACCCTCTTCCTCTTCTTCTTCATCACTCTCTACTCCAAACAGACAAGGCCATTACTACAATAGATCAAAGCAAGACAAAATCAAAATAATGAAACACAGACACAGCACAGACAGTGTCATCATGCGTTCATCTTTGCCTGAAACACCAAGATTGTCCTCAGAAAAAACATCATATGTTGAACATAGACTATCTCTCCAAATCAACAAAGAAAACAGAAATCTTGGTGAAGATTTAGAGACTCCTCGTTCTTCATTTTCAAAAAGGAAATTTTTTGATGATAACAACAATTGTAGAAGTCCAAGTCATTATGCAAGACAAATTGTTAAGCAGGTGAAAGAAAGTGTGAGTAGAAATGTTGGTATTGACATAACCAACACAGTGAAAAACAGAGAACAAGTTAAAGAAGAATTTGTTGGTCAAATCAGATTCAAGAAAGCTCTCAAACCATTAACAAAACCATTAGAAGAATCAAACCAAGGAAACAAAAACACATCTCATTCCCCAAGACTCAGCAGATTCAATGATACAAACCACAAACATTCACCAAAAAAAGACCAAAACCAAAATACACTCCAAGTACTAAAACAATCATCACCACCACCTGTAGTCAACATTGAAGCACAGGTTTCAAGAGTTTCAACAAAGCCAAAACTTCAAGCAATGTCAGAGAAGGAGGACAAAAAAACTTTCCCAAAATGCAAGAAAACAGCACCTGGGAATTTGAGTCCACGGAACAACAATAAGCCTCCACAGTCATCATCAATCAGAAACAAGCAAGAAGAATCATTCATTCTCCGACCATCATCATCAACCACTAAAGCTAATTATATCAAAACCAAAAGCAAGAAAACTCATCCACTTTCAAATAACTCTGTCCCAAATCTTCTCCCTCTCAAAACACACCCTTCTCCTCTAGCTACAAAAATCCCTCAAAAACAGGTAAATGATGATGTCCAAGAAGCCAAAAACATGTCACAGTTATTTAATTGTTCGCGCCAAAAGTACACACTCGCCACCCGAGGAACCACTAACGGTTCAATCGCCGCCGCCGGAGCCGAAGAAGAAGGGCCAGAATATCAATACATTACAACCATTCTAAGCCGTACCGGAATACACAGAGCAACAATAACCAGCCTTCAACATTTTCAATGGTTCTCTTCAACACATCCATTAGACCCATCAATTTTCCACCGTCTTGAACTCTACCCAACAACTAATTCCTTAGTTTCAATTCCCAACAACCATAAAGATATAAACTTTACGCAGAAAAATCAAGTGGGTCCACGTTGTAACCGTAGATTACTGTTTGATTTAGTCGATGAAGTATTGTCGGAAATCCTCACTAAACCAAAATGTTACCGTGGGTTATTGTTGGAAACAGTTTGGAAAAAAGTTGGGAGCTTCCCACGTGCGAAATGTGAGGTTTTAGAAGACATTGATGGGTTGATAGAGATGAAGATGGTGATGGATGAAGTTAAGGAAGAAGAAGAAGAAGAGGAAAAGTTGGTAGCGGAAATTGAAGGGAAAGTATTGGAGATGTTGGTGAATGAAACGTTAACCGTTATGGTGGGTCCGTACAAAAAGAACGGCGTCGTTTTGTGA 2013 0.3865 MGKDNWYWGGRRSSTNKRKPATDIPSGCMCAVFQAFDFHPFNFSINQQHQQQQQNTFNSASPIQITLPKGAEAPRNSLESEDGTSSSISKEDNFKIPNIRIKTGSDKSFNDLNSPGTKTPTLVARLMGLELLPDANSPSSSSSSSLSTPNRQGHYYNRSKQDKIKIMKHRHSTDSVIMRSSLPETPRLSSEKTSYVEHRLSLQINKENRNLGEDLETPRSSFSKRKFFDDNNNCRSPSHYARQIVKQVKESVSRNVGIDITNTVKNREQVKEEFVGQIRFKKALKPLTKPLEESNQGNKNTSHSPRLSRFNDTNHKHSPKKDQNQNTLQVLKQSSPPPVVNIEAQVSRVSTKPKLQAMSEKEDKKTFPKCKKTAPGNLSPRNNNKPPQSSSIRNKQEESFILRPSSSTTKANYIKTKSKKTHPLSNNSVPNLLPLKTHPSPLATKIPQKQVNDDVQEAKNMSQLFNCSRQKYTLATRGTTNGSIAAAGAEEEGPEYQYITTILSRTGIHRATITSLQHFQWFSSTHPLDPSIFHRLELYPTTNSLVSIPNNHKDINFTQKNQVGPRCNRRLLFDLVDEVLSEILTKPKCYRGLLLETVWKKVGSFPRAKCEVLEDIDGLIEMKMVMDEVKEEEEEEEKLVAEIEGKVLEMLVNETLTVMVGPYKKNGVVL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0693 670 MobiDBLite consensus disorder prediction 135 155 - -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 291 308 - -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 78 93 - -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 286 411 - -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 355 370 - -
Tpr1g0693 670 Pfam Domain of unknown function (DUF4378) 495 654 IPR025486 -
Tpr1g0693 670 PANTHER DUF4378 DOMAIN PROTEIN 1 664 - -
Tpr1g0693 670 Pfam DUF761-associated sequence motif 111 137 IPR032795 -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 376 411 - -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 135 161 - -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 323 354 - -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 69 99 - -
Tpr1g0693 670 MobiDBLite consensus disorder prediction 1 21 - -
Tpr1g0693 670 Coils Coil 619 649 - -
Tpr1g0693 670 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0693 Tpr-Chr1 5881238 5884579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0693 114 669 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.792 1.32e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0693 - - mtr:MTR_1g101910 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0693 1 5881238 5884579 Tpr1g0693 1 5881238 5884579 ECH
Tpr2g4416 2 48317889 48322099 Tpr1g0693 1 5881238 5884579 PCT