Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0686 ATGTCAGGTCAACCCTTCTCACCACCTGAACCCATGATCGATCCCTTTCTCCATCTCAAAATCTCCCTAAATCCCGACGGCACAATCACACGTCTACGTGGAGACCAACACATCTCTCCCTCACCAAATCCCAACCTTCCAATCCCTGTTCTCACCAAAGACATCCTCATCAACCCATCACACAAAACCACCGCTAGAATATTCCTTCCCCGCAAAACACTCGATCATAACCCCTTCCACAAGCTCCCTATAATTGTTTACTTTCACGGTGGCGGTTTCATCCTCTTCAGTGCAGCCTCAGATTTTCTTCACGATCTTTGTATAAACCTTGCAAACGACGTTAACTCCATTGTTGTTTCCGTTGACTATCGTTTAGCACCAGAACACCGTTTACCTGCTGCGTATGATGATGCTATGGAAGCTCTGCACTGGATCAAAACTCAATCAGATGATTGGTTGAAAAACTATGGTGATTATTCAAATTGTTACATCATGGGAGGTAGTGCTGGAGCAAATATTGCATACAAAGCTGGTCTACGTGTAGCTGCAGAGACTAATGTTAATCATGATTATCTGAAGCCACTTAAGATTAGAGGCTTAATATTGTCTCAACCGTTTTTTGGTAGTACCAAGAGGGTAGCTTCGGAGTTGAGGCTGTTAAACGATGTGGTTTTGCCACCGCACGTGTGTGACTTGATGTGGGAGCTTTCTTTGCCGATTGGAGTTGACCGTGATCATGAATATTGCAATCCAACGGTTGGTGATAGTGTTGGAGGTTTGGATAGGGTGAGGGAGCTTGGGTGGAGGGTGTTGGTGAGTGGGTGCGATGGGGACCCGTTGATGGACCATCAGATGGCGTTGGCGAGAGTGATTGAAGAGAAAGATGTGGTGGTGGTGAGAAGTTTTACAAAAGGGGGTTGTCATGGGGCTGAGGTTCGTGATCTTATCAAGCAAAAACAATTGCACGATCTAATTAAAGATTTCATTTCTTTCCTACAGAATTAA 1005 0.4498 MSGQPFSPPEPMIDPFLHLKISLNPDGTITRLRGDQHISPSPNPNLPIPVLTKDILINPSHKTTARIFLPRKTLDHNPFHKLPIIVYFHGGGFILFSAASDFLHDLCINLANDVNSIVVSVDYRLAPEHRLPAAYDDAMEALHWIKTQSDDWLKNYGDYSNCYIMGGSAGANIAYKAGLRVAAETNVNHDYLKPLKIRGLILSQPFFGSTKRVASELRLLNDVVLPPHVCDLMWELSLPIGVDRDHEYCNPTVGDSVGGLDRVRELGWRVLVSGCDGDPLMDHQMALARVIEEKDVVVVRSFTKGGCHGAEVRDLIKQKQLHDLIKDFISFLQN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0686 334 PANTHER CARBOXYLESTERASE 120-RELATED 10 331 - -
Tpr1g0686 334 Gene3D alpha/beta hydrolase 16 331 IPR029058 -
Tpr1g0686 334 SUPERFAMILY alpha/beta-Hydrolases 25 329 IPR029058 -
Tpr1g0686 334 Pfam alpha/beta hydrolase fold 85 309 IPR013094 GO:0016787
Tpr1g0686 334 PANTHER ARYLACETAMIDE DEACETYLASE 10 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0686 Tpr-Chr1 5808644 5810024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0686 11 309 Carbohydrate Esterase AT1G68620 34.868 2.17e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0686 - - gmx:100777786 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4421 2 48425109 48428427 Tpr1g0686 1 5808644 5810024 PCT
Tpr1g0686 1 5808644 5810024 Tpr2g4422 2 48429425 48430927 PCT