Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0685 ATGTCTTTGTCACTACACATTATCGCTACTACTGCTTTATTATCCTTACATTTCTTTCTCTTGTTTGTTAACTCATCATCAATAGATCCCTACAAAACACTTCACTTAATCCTCAACCCAAACGGAACCGTCACACGTTTAGACACAATCCCACAATCCCCACCCTCACCGGATCCCAATCTCCCCACACCCGCTCTCTCCAAAGACCTCACCATCAACCAATCAAAACACACTTGGGCACGAATCTACCTACCCCACAAATCACCAAAGTCCAAACTACCCCTCATCGTTTTCTACCATGGCGGTGGCTTCATTTTCTACAGCGCCGCTTCAACTTACTTCCACAACTTCTGCGCTAACCTCGCTAATCAAACTCAATCCGTCGTCGTTTCACTCGACTACCGCCTCGCACCAGAACACCGTCTTCCTGCAGCGTACTATGACTCCGTGGAAGTGCTTCACTGGATTAAAACCTCAAAAGATCCATGGTTGACACGTCATGTTGATTACTCTCGTTGTTATTTAATGGGAGAGAGTGCTGGAGGTAATATCGCCTACAACGCGGGTCTACGTGCGGCTTCAATAGTTAATGAGATTAAACCGGTTAATATCAAAGGGTTGATATTGATTCAACCGTTTTTTGGTGGGACCAAGAGGACACCGTCTGAATTAAGACTTGAGAAGGATCTGAATCTACCGTTGATTGTTACTGATTCGATGTGGAATTTGTCGTTACCGTTAGGCGTTGATCGTGATTACGTGTATTCTAATCCGACGGTGAATGGTGGGGGTAAGATTTTGGATAAGATTAGGTTGTTTGGGTGGAAGGTTGCGGTGTTTGGTTGTGATGGGGATCAACTTGTGGACCGACAGAGGGAATTGGTGAAGTTGCTTGAGGGTAAAAGTGTCAATGTAGTGGGTCAATTTTATAGTGGGGGTAGACATGGTATTTTTGTGGGTGATGCTTCCATGTCTGAAAAGGTGTTCGATTTGGTTAAGAGTTTCTATTGA 1011 0.4451 MSLSLHIIATTALLSLHFFLLFVNSSSIDPYKTLHLILNPNGTVTRLDTIPQSPPSPDPNLPTPALSKDLTINQSKHTWARIYLPHKSPKSKLPLIVFYHGGGFIFYSAASTYFHNFCANLANQTQSVVVSLDYRLAPEHRLPAAYYDSVEVLHWIKTSKDPWLTRHVDYSRCYLMGESAGGNIAYNAGLRAASIVNEIKPVNIKGLILIQPFFGGTKRTPSELRLEKDLNLPLIVTDSMWNLSLPLGVDRDYVYSNPTVNGGGKILDKIRLFGWKVAVFGCDGDQLVDRQRELVKLLEGKSVNVVGQFYSGGRHGIFVGDASMSEKVFDLVKSFY* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0685 336 SUPERFAMILY alpha/beta-Hydrolases 41 334 IPR029058 -
Tpr1g0685 336 PANTHER ARYLACETAMIDE DEACETYLASE 29 334 - -
Tpr1g0685 336 Pfam alpha/beta hydrolase fold 96 318 IPR013094 GO:0016787
Tpr1g0685 336 Gene3D alpha/beta hydrolase 31 336 IPR029058 -
Tpr1g0685 336 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 29 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0685 Tpr-Chr1 5804323 5805947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0685 41 332 Carbohydrate Esterase AT5G16080 35.294 1.32e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0685 - - gmx:100777262 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0685 1 5804323 5805947 Tpr1g0685 1 5804323 5805947 ECH
Tpr2g4422 2 48429425 48430927 Tpr1g0685 1 5804323 5805947 PCT
Tpr1g0685 1 5804323 5805947 Tpr2g4423 2 48433176 48434180 PCT