Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0684 ATGTCCTTGAAATGTTTATGTTGTTTTCTTTCTAATGAAGAAGAGCATGGCCAAAGAAGGAATGTTGATGACAAGAAAAATACTGTTAGGGACTATCCATGGGACAGATACACCTTGAAGGAGTTGCTTCGCGCAACAAACAATTTTCATCAAGATAACAAGATTGGAGAAGGTGGATTTGGAAGTGTATATTGGGGTCAAACAAGTAAAGGCGTCGAGATTGCTGTGAAGAGGTTGAAGACAATGACTGCAAAAGCAGAGATGGAATTTGCAGTTGAAGTGGAAGTACTTGGAAGGGTGAGGCATAGGAATTTGTTAGGATTGAGGGGATTCTATGCAGGTGGAGAAGAAAGGTTAATTGTGTATGATTACATGCCTAATCATAGTTTACTCACTCATTTACATGGTCAACTTGCCTCTGATTGTTTACTAGATTGGTCTAGAAGAATGAGCATAATAATTGGTGCAGCTGAAGGTTTAGCGTATTTGCACCATGAGGCAAATCCTCACATAATTCATAGAGACATAAAAGCAAGCAATGTTCTTCTAGACACAGAGTTTCAAGCCAAGGTAGCTGATTTTGGTTTTGCAAAGTTAATACCAGCAGGTGTAAGCCATTTAACAACAAGGGTTAAAGGTACACTTGGTTATTTAGCACCAGAATATGCTATGTGGGGTAAAGTTTCTGAGAGTTGTGATGTTTATAGTTTTGGAATTTTACTTTTGGAAATTATAAGTGCCAAAAAACCAATTGAAAAACTACCTGGTGGAATAAAAAGAGACATTGTTCAATGGGTCACACCTTATGTACAAAAGGGTGTTTTTAAGCATATTGCTGATCCAAAATTGAAAGGAAATTTTGATTTAGAACAACTGAAATCAGTGATTATGTTAGCTTTGAAGTGCACTGATGGTAGTCCTGAGAAAAGGCCTAGCATGGAAGAGGTAGTGGAATGGCTTAGGGATGGTGTCTCAAAGAAAAAGGGTGATGATGAAGGAAATGATGATAACTATGAAGAGTTTGTAACAATGCAAACCAATAATTTGAAAATAATAAGTGATAATGATAGGCGCAAGATGAGATGA 1086 0.372 MSLKCLCCFLSNEEEHGQRRNVDDKKNTVRDYPWDRYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHRNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLASDCLLDWSRRMSIIIGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFKHIADPKLKGNFDLEQLKSVIMLALKCTDGSPEKRPSMEEVVEWLRDGVSKKKGDDEGNDDNYEEFVTMQTNNLKIISDNDRRKMR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0684 361 Pfam Protein kinase domain 49 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0684 361 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Tpr1g0684 361 SMART serkin_6 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0684 361 SUPERFAMILY Protein kinase-like (PK-like) 33 323 IPR011009 -
Tpr1g0684 361 PANTHER - 2 334 - -
Tpr1g0684 361 ProSiteProfiles Protein kinase domain profile. 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0684 361 PIRSF ILK 10 331 - -
Tpr1g0684 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Tpr1g0684 361 Gene3D Transferase(Phosphotransferase) domain 1 125 337 - -
Tpr1g0684 361 CDD STKc_IRAK 55 320 - -
Tpr1g0684 361 Gene3D Phosphorylase Kinase; domain 1 11 124 - -
Tpr1g0684 361 PANTHER OS01G0750732 PROTEIN 2 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0684 Tpr-Chr1 5782333 5785179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0684 36 327 Receptor kinase-like Gene Family AT1G60800 45.424 4.85e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Tpr1g0684 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0684 - - gmx:100817283 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0684 1 5782333 5785179 Tpr1g0684 1 5782333 5785179 ECH