Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0680 ATGGAAAAAATGAGTTGCATTCTAACATGTTTTCTCTTGAGTATAGTCTTATCAACAAATGCTGAATTTACCAAAAAGACTTACATCATTCAAATGGATCACTCAGCAAAACCAGACATATTTTCCAATCACTTAGAATGGTATTCATCAAAAGTAAAATCAGTACTGTCTAGATCAGTAGAATCTGATATAGACAACAATGAAGAAGAAAGAATCATTTACAGTTACAACACTGCTTTTCATGGAATGGCTGCTAAGTTAAGCCAAGAAGAAGTAAAAAAGCTGGAATCTGAAGCTGGTGTTGTAGCTATATTCCCTGAAACAAAGTATGAACTACACACAACAAGAAGTCCATATTTTCTTGGTCTTGAACCAATTCAAAGCAGCAACAACAGTTTTTCAGAAAAGCTGGTTAACCATGATGTTATAGTTGGTGTGTTAGATACTGGTGTTTGGCCTGAGAGTGAGAGTTTCAATGATGCAGGAATGAAACCAGTACCTTCTCACTGGAAAGGTGCATGTGAAACTGGTAGAGGATTCAGAAATCATCACTGCAATAAGAAGATTGTAGGTGCTAGAATATTCTACCATGGATATGAAGCAGCAACTGGTAAGATTGATGAGCAAGCAGATTATAAATCACCTAGAGATCAAGATGGTCATGGAACTCACACTGCAGCTACTGTTGCCGGATCTCCGGTTCGTGGTGCTAATCTTCTTGGTTATGCTTATGGAACTGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCTTACAAAGTGTGTTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCTGTTGATACAGCTGTAGCTGATGGAGTAAATGTTCTATCCATCTCTTTAGGTGGTGGAGTCTCATCTTACAACCATGATAGTTTAGCTGTAGCTGCATTTGGAGCCATGGAAAAGGGTGTTTTTGTTTCATGCTCAGCTGGAAATTCAGGACCTGACCCTGTCAGCCTAACAAATGTGTCACCATGGATCACCACAGTTGGAGCTAGTACAATGGACAGAGATTTTCCTGCAGATGTTAGCCTTGGCAATGGAAGAAAAATAATAGGAACATCACTCTATAAAGGAAAAAGCATGCTCTCAACTAGAAAACAATACCCTTTGGTATACATGGGAGGTAACTCAAGTAGTCCTGATCCAAGATCTTTGTGCTTGGAAGGTACTTTAGATCGTAGAGTCGTCACCGGAAAGATTGTGATTTGTGATAGAGGAATTAGTCCTAGAGTGCAAAAGGGTCAGGTAGTGAAAAATGCAGGAGGAGTAGGAATGATTCTCACAAACACTGCAGCAAATGGTGAAGAACTTGTAGCAGATTGTCACCTACTTCCAGCAGTAGCAGTAGGAGAAAAAGAAGGCAAAGAAATCAAACAATATGTGTTAACAAATAAAAAAGCATCTGCAACATTAGCTTTTCTAAACACAAGATTAGGAATTAAACCATCACCTATAGTAGCTGCTTTTTCATCAAGAGGGCCTAATTTTCTAACACTTGAAATTCTTAAACCTGATATAGTAGCACCTGGTGTGAACATTCTTGCTGCTTGGAGTGGAGTTACTGGTCCATCAAGTTTATCAACAGATCATAGAAGAGTGAAATTTAATATACTTTCCGGAACTTCGATGTCATGCCCTCATGTAAGTGGAATCGCCGCTTTGATCAAAGCTAAACACCCTGATTGGAGTCCGGCCGCTATAAAATCAGCAATCATGACAACAGCTTATGTTCATGATAATACTATTAAGCCTCTTAGAGATGCATCTTCTGCTGAAATTTCAACTCCTTATGATCATGGTGCTGGTCACATTAATCCTAGAAAAGCTCTTGATCCTGGTTTAGTATATGATATTGCACCTCAAGATTATTTTGAGTTTCTTTGCACACAGAAACTAAGTCCTTCAGAGTTAGGAGTGTTTGCCAAAAATTCAAACAGAATTTGCAAACACACTCTTGCTAGTGTTGGTGATTTGAACTATCCAGCTATATCAGTAGTGTTTCCAGAGAAAATAACCGGTTCGGTTTCGACAGTTCACAGAACTGTTACCAATGTTGGACCTGCTGTTTCAAAATATCATGTCATTGTTACACCATTCAAAGGTACTGTTGTTAAAGTTGAGCCAAATACATTGAATTTTACAAGAAAATATCAGAAATTATCTTACAAGATTAGTTTCAAAGTTACAACAAGGCAAAGTGAACCAGAATTTGGAGGTTTGGTGTGGAAAGATGGGGTGCATAAAGTAAGAAGTCCCATTGTGATAACATATCTGCCACCAATGTGA 2322 0.3863 MEKMSCILTCFLLSIVLSTNAEFTKKTYIIQMDHSAKPDIFSNHLEWYSSKVKSVLSRSVESDIDNNEEERIIYSYNTAFHGMAAKLSQEEVKKLESEAGVVAIFPETKYELHTTRSPYFLGLEPIQSSNNSFSEKLVNHDVIVGVLDTGVWPESESFNDAGMKPVPSHWKGACETGRGFRNHHCNKKIVGARIFYHGYEAATGKIDEQADYKSPRDQDGHGTHTAATVAGSPVRGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDTAVADGVNVLSISLGGGVSSYNHDSLAVAAFGAMEKGVFVSCSAGNSGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKIIGTSLYKGKSMLSTRKQYPLVYMGGNSSSPDPRSLCLEGTLDRRVVTGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAVGEKEGKEIKQYVLTNKKASATLAFLNTRLGIKPSPIVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGVTGPSSLSTDHRRVKFNILSGTSMSCPHVSGIAALIKAKHPDWSPAAIKSAIMTTAYVHDNTIKPLRDASSAEISTPYDHGAGHINPRKALDPGLVYDIAPQDYFEFLCTQKLSPSELGVFAKNSNRICKHTLASVGDLNYPAISVVFPEKITGSVSTVHRTVTNVGPAVSKYHVIVTPFKGTVVKVEPNTLNFTRKYQKLSYKISFKVTTRQSEPEFGGLVWKDGVHKVRSPIVITYLPPM* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0680 773 SUPERFAMILY Subtilisin-like 112 626 IPR036852 GO:0004252|GO:0006508
Tpr1g0680 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Tpr1g0680 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 767 IPR045051 -
Tpr1g0680 773 Gene3D - 347 491 - -
Tpr1g0680 773 Pfam Fibronectin type-III domain 669 767 IPR041469 -
Tpr1g0680 773 CDD Peptidases_S8_3 110 588 IPR034197 -
Tpr1g0680 773 Pfam Subtilase family 141 592 IPR000209 GO:0006508|GO:0008236
Tpr1g0680 773 Pfam PA domain 379 469 IPR003137 -
Tpr1g0680 773 PANTHER XYLEM SERINE PROTEINASE 1 18 767 - -
Tpr1g0680 773 Pfam Peptidase inhibitor I9 27 113 IPR010259 -
Tpr1g0680 773 ProSiteProfiles Serine proteases, subtilase domain profile. 120 622 - -
Tpr1g0680 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 113 IPR037045 -
Tpr1g0680 773 CDD PA_subtilisin_like 353 483 - -
Tpr1g0680 773 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Tpr1g0680 773 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Tpr1g0680 773 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Tpr1g0680 773 Gene3D - 639 770 - -
Tpr1g0680 773 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0680 Tpr-Chr1 5747182 5750210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0680 12 773 Subtilisin-like Serine Gene Family AT5G51750 70.893 0.0 1142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0680 - - gmx:102661592 1328.54