Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0670 ATGAAAGAAAAAGGATTCTTGCTTTTATACTATTCTGGCAAGAACAAGTTGAGGTTTTTCATGTTCCCTTTGACATTGATGGTTTTCATGGTGTTGGTGATTTCTCCATTTGCATTTTCACTCAGTCAAGAAGGACAAGCATTAATGGCAATGAAGTCTTCCTTCAACAACATAGCTGACGTTCTGCTTGACTGGGATGATGTGCACAATGATGACTTCTGCTCATGGCGTGGTGTTTTGTGTGATAATGTCAGTGTTGCTCTTACTGTGGTATCTCTGAATTTGTCAAGCTTGAATCTTGGTGGTGAGATTTCACCAACTGTTGGTGATTTAAGAAACTTGCAGTCCATCGACTTGCAAGGGAACAAGTTAACTGGTCAAATCCCGGATGAAATTGGAAACTGTGGTGCACTGGTTCATCTGGATTTATCTGATAATCAGCTATATGGTGATATACCTTACTCTATATCAAAGCTGAAGCAACTTGAGTTTTTGAATTTGAAGAACAATCAGTTGACTGGTCCTATTCCTTCTACTTTATCCCAAATTCCAAACCTTAAGACTCTTGATCTTGCTCGAAATAAGTTTAGAGGAGAGATACCAAGGCTACTCTATTGGAATGAAGTATTGCAATACCTTGGATTGCGAGGGAACATGTTGACAGGAATTTTATCTCCCGATATTTGCCAGTTATCTGGTTTGTGGTACTTTGATGTCAGAGACAATAATTTGACTGGTACTATACCTGAAAGCATCGGCAACTGTACAAGTTTTGAAATCTTCGATATATCATATAATCAGATTACTGGGGAGATTCCTTATAACATTGGATTTCTTCAAGTAGCTACTTTGTCACTTCAAGGAAATAGATTAACTGGGAAGATACCAGAAGTGATTGGTTTGATGCAAGCTCTAGCAATTTTGGATTTGAGTGAGAATCAGTTAGTGGGACCAATTCCTCCAATACTAGGAAATCTGTCTTACACCGGCAAGATGTACCTTCATGGAAACATGCTCACTGGTTCAATACCTCCCGAGCTTGGCAACATGTCTAAACTGAGCTACCTGCAATTGAATGATAATCAACTGGTGGGGCAAATTCCTAATGAGTTTGGCAAACTTGTACATCTGTTTGAATTGAATCTTGCCAATAATCGTCTTGATGGATCTATTCCACATAACATAAGCTCATGCACGGCCTTAAATCAGTTTAATGTGCACGGCAATCAATTAAGCGGTTCTATTCCGTTAAGCTTTCGTAACCTTGAGAGTTTGACTTATTTGAACCTCTCTGCTAACAACTTCAAGGGGCATATACCGGTTGAGTTGGGTCATATCATTAATCTTGATACGCTGGACCTATCTAGCAATAATTTTTCAGGCAATGTTCCAGCTTCAGTTGGTTATCTCGAGCATCTTTTGACACTGAACTTGAGTCATAACCATCTTGACGGTCCCTTGTCTGCTGAATTTGGAAATCTCAGAAGTATACAGACTATTGATATGTCCTTCAACAATCTGTCGGGCAACATTCCTCCAGAAATTGGACAGCTGCAGAACCTTGCATCTCTGATTTTGAACAACAATGACCTGCATGGGAAGATTCCGGAACAGCTCACCAATTGTTTCAGTCTTACTTCCATGAACTTATCTTATAACAACTTAACTGGAATAGTTCCATCTACGAAGAACTTCACGCAGTTCTCAGCTGACAGCTTCATTGGAAATCCCTTATTATGTGGAACTTGGATAGGATCTATATGTCGTCCTTATGTTCCAAAGTCGAGAGAGATTTTTTCTAAAGTTGCAGTTGTATGTCTCACTCTTGGTATCATCGTTTTATTGGCTATGGTAACTATTGCTGTCTATAGATCCATCCAATCGAAGCAGCTGATGAAAGGATCTAGTAAGACTGTGCAAGTGCCTCCTAAACTTGTAATTCTTCATATGGATTTGGCATTACATACTTTGGATGATATAATGAGAAGCACCGAGAATCTCAGTGAGAAATTTATCGTAGGGTGTGGTGCCTCTAGTACTGTATACAAGTGTGTGTTGAAAAACTCCCGACCGATTGCAGTCAAGCGATTGTACAATCAGCATCCACACAATATAAGGGATTTTGAAACAGAACTTGAAACAATTGGCAGCATTAGACATAGAAATCTTGTCACCTTGCATGGCTATGCACTTACTCCTTACGGGAATCTCCTTTTCTATGAGTACATGGCAAATGGTTCTCTTTGGGATCTTCTACATGGTCCACTAAAGGTAAAACTTGATTGGGAAACACGGATGAGGATTGCTGTTGGAGCTGCTGAAGGACTTGCATATCTTCACCATGATTGCAACCCTCGAATTGTTCACAGGGACATTAAGTCTTCAAATATTTTGCTGGATGAGAACTTCGAGGCTCACCTCTCTGATTTTGGCACCGCTAAATGCATCCCAGCCACAAAAACTCACGCCTCAACTTATGTTCTTGGAACTATTGGCTATATTGATCCTGAATATGCACGAACATCTAGGCTGAATGAAAAATCTGATGTGTATAGCTTTGGCATTGTTCTGCTTGAGCTACTTACTGGGAAGAAGGCAGTGGACAATGATTCTAATTTGCATCAATTGATACTTTCCAAGGCTGATAATAACACTGTAATGGAGGCGGTGGATCCAGAGGTTTCCATTACCTGCATTGATTTGGCTCATGTCAAGAAAACCTTTCAACTTGCTCTGCTTTGCACGAGAAAGAACTCTTCCGAGAGACCTACCATGCACGAAGTAGCTAGGGTGCTTATTTCACTACTTCCCGCACCTCCAAGTAAAGTTAAAGTTGTCGCTACTGCTGCTGCTGCTGCTAAGAGTTTTGACTATGCACCTTTTGTGGTTGAGAAGGGACAGCAACACCGAAAATTGGATGGACTACCACCTCAGCAGGATAGCAGTTCACCAAATGCTGAATGGTTTGTTCGTTTTGGGGATGTCATATCCAAGAGCTCCCACTGA 3006 0.4059 MKEKGFLLLYYSGKNKLRFFMFPLTLMVFMVLVISPFAFSLSQEGQALMAMKSSFNNIADVLLDWDDVHNDDFCSWRGVLCDNVSVALTVVSLNLSSLNLGGEISPTVGDLRNLQSIDLQGNKLTGQIPDEIGNCGALVHLDLSDNQLYGDIPYSISKLKQLEFLNLKNNQLTGPIPSTLSQIPNLKTLDLARNKFRGEIPRLLYWNEVLQYLGLRGNMLTGILSPDICQLSGLWYFDVRDNNLTGTIPESIGNCTSFEIFDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENQLVGPIPPILGNLSYTGKMYLHGNMLTGSIPPELGNMSKLSYLQLNDNQLVGQIPNEFGKLVHLFELNLANNRLDGSIPHNISSCTALNQFNVHGNQLSGSIPLSFRNLESLTYLNLSANNFKGHIPVELGHIINLDTLDLSSNNFSGNVPASVGYLEHLLTLNLSHNHLDGPLSAEFGNLRSIQTIDMSFNNLSGNIPPEIGQLQNLASLILNNNDLHGKIPEQLTNCFSLTSMNLSYNNLTGIVPSTKNFTQFSADSFIGNPLLCGTWIGSICRPYVPKSREIFSKVAVVCLTLGIIVLLAMVTIAVYRSIQSKQLMKGSSKTVQVPPKLVILHMDLALHTLDDIMRSTENLSEKFIVGCGASSTVYKCVLKNSRPIAVKRLYNQHPHNIRDFETELETIGSIRHRNLVTLHGYALTPYGNLLFYEYMANGSLWDLLHGPLKVKLDWETRMRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKCIPATKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHQLILSKADNNTVMEAVDPEVSITCIDLAHVKKTFQLALLCTRKNSSERPTMHEVARVLISLLPAPPSKVKVVATAAAAAKSFDYAPFVVEKGQQHRKLDGLPPQQDSSSPNAEWFVRFGDVISKSSH* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0670 1001 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Tpr1g0670 1001 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 32 968 - -
Tpr1g0670 1001 SMART LRR_typ_2 159 182 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 183 207 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 422 446 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 111 135 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 518 542 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 470 493 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 302 326 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 231 255 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 350 373 IPR003591 -
Tpr1g0670 1001 SMART LRR_typ_2 374 398 IPR003591 -
Tpr1g0670 1001 Gene3D Ribonuclease Inhibitor 302 590 IPR032675 -
Tpr1g0670 1001 Pfam Leucine rich repeat N-terminal domain 42 82 IPR013210 -
Tpr1g0670 1001 SUPERFAMILY L domain-like 42 338 - -
Tpr1g0670 1001 SUPERFAMILY L domain-like 324 581 - -
Tpr1g0670 1001 Pfam Protein kinase domain 672 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0670 1001 Gene3D Transferase(Phosphotransferase) domain 1 743 946 - -
Tpr1g0670 1001 Gene3D Ribonuclease Inhibitor 208 297 IPR032675 -
Tpr1g0670 1001 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Tpr1g0670 1001 Pfam Leucine rich repeat 448 507 IPR001611 GO:0005515
Tpr1g0670 1001 Gene3D Phosphorylase Kinase; domain 1 627 742 - -
Tpr1g0670 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Tpr1g0670 1001 ProSiteProfiles Protein kinase domain profile. 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0670 1001 SMART serkin_6 667 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0670 1001 Gene3D Ribonuclease Inhibitor 41 207 IPR032675 -
Tpr1g0670 1001 SUPERFAMILY Protein kinase-like (PK-like) 650 932 IPR011009 -
Tpr1g0670 1001 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 32 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0670 Tpr-Chr1 5628158 5636605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0670 375 578 Receptor kinase-like Gene Family AT5G07180 34.314 2.25e-24 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Tpr1g0670 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0670 K20718 - gmx:100811653 1667.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0670 1 5628158 5636605 Tpr1g0670 1 5628158 5636605 ECH