Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0654 ATGAATCTTCATCATGGTGGAGTTAAGGAGGAGTTTGTGGGAGGAAGTTCTTCATTTTGTGTGGTTGGTGATCCTCAACCAATGGAAGGACTTCATGAAAATGGTCCTCCACCATTCCTTACAAAAACATATGATATAGTTGATGATCCTTCCACAAATCATATAGTTTCATGGAGTAGAGGGAACAATAGCTTTGTTGTTTGGGATCCTCAAGCCTTTTCCATTAGTCTTCTCCCTAGATTCTTCAAGCACAACAATTTCACCAGTTTTGTCAGACAACTTAACACATATGGATTTAAAAAGGTTGATCCAGATAGGTGGGAATTTGCTAATGAGATGTTTCTAAGAGGACAAAAAATCCTTTTAAAGAACATAACTAGAAGGAGAAAAACAAATCAATCTCAAGCAATGCAACAACAAGCTCTAGACCCTTCATGTGTTGAGGTAGGAAGATTTGGATTAGACGGAATTGAAATCGATCGGTTAAGGCGCGACAGACAAGTTCTAATGGTTGAATTGGTGAAACTTAGACAACAGCAACAAAATACTAGAACTTACATTGAAGCAATGGAAGAAAGGCTTAAAAGAAATGAACATAAACAAAAACAGATGATGAATTTCTTGGTAAGAGCAATGCAAAATCCTAATTTCTTGCAACAATTGGTTCAGAAGAAGGAATGGAGAAAAGAGTTAGAAGAAGTTTTTTGTAAGAAGAGGAGAAGAACTATTGATCAAGGGCCTAGTAATGTTGAAGTAGGAGATGTTGAGGAACATGCTAATCTCATGAACCAACTTGAAATTAGAGATAAAGAGATTGATGTTGAAGTGTTTTGGCAAGATTTGTTTAAAGAGGATATTGAAGATGAAGTAGATGTTGAAGATGTACAAGTATTGGTTGAGCAACTTGGTTATCTTGCCTCTAGTCTTCCTAAATAG 936 0.3622 MNLHHGGVKEEFVGGSSSFCVVGDPQPMEGLHENGPPPFLTKTYDIVDDPSTNHIVSWSRGNNSFVVWDPQAFSISLLPRFFKHNNFTSFVRQLNTYGFKKVDPDRWEFANEMFLRGQKILLKNITRRRKTNQSQAMQQQALDPSCVEVGRFGLDGIEIDRLRRDRQVLMVELVKLRQQQQNTRTYIEAMEERLKRNEHKQKQMMNFLVRAMQNPNFLQQLVQKKEWRKELEEVFCKKRRRTIDQGPSNVEVGDVEEHANLMNQLEIRDKEIDVEVFWQDLFKEDIEDEVDVEDVQVLVEQLGYLASSLPK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0654 311 Gene3D - 31 129 IPR036388 -
Tpr1g0654 311 PRINTS Heat shock factor (HSF) domain signature 39 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr1g0654 311 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr1g0654 311 PRINTS Heat shock factor (HSF) domain signature 90 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr1g0654 311 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 19 259 - -
Tpr1g0654 311 SMART hsfneu3 35 128 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr1g0654 311 SUPERFAMILY "Winged helix" DNA-binding domain 34 128 IPR036390 -
Tpr1g0654 311 ProSitePatterns HSF-type DNA-binding domain signature. 78 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr1g0654 311 Pfam HSF-type DNA-binding 39 128 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr1g0654 311 Coils Coil 159 193 - -
Tpr1g0654 311 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 259 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0654 Tpr-Chr1 5503095 5505226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0654 25 260 HSF AT3G22830 68.724 3.52e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tpr1g0654 HSF_DNA-bind 2.3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0654 K09419 - gmx:100809515 418.698