Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0650 ATGAACGGCGGAACCACCCTCACCTCCGTCCGATCCATCCTCGACAAACCCCTTAACCAGCTCACCGAAGATGACATTTCTCAACTCACTCGTGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCTCAGGCGATCCAGCAAGTCATTTCTCTCAAAGCACTTCTAGAACCTACCGCCGATGATCTCCCTGCTCCCGTCGGCGTCTCCTCCGCCATTCACCACCATCATCACCACCACCCTCAACCTCCTCAGAGGAATTTGAATGAAGCTCCGGCGAAGGGTGCCGATCCCGATGATACCGGTTTTCATGCTGTGGAGGATCTTAAGAAATCCACCACTTCAACTGCTGCGGAAAAAGCTACTGAAACGAATGATGCCAATGTTGTTAAACTCTCCGGGGGGTGCGCAGCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAAGTGAATGTCTATGATGGAGTCTCACCGGATAAGGCACAATCAATCATGCAGCTTGCTGCATGTCCATCCTCGTTTCCTCAGGATAATCTTTTAAATAAAAATGCAGCAGTTTGGGCTTCTCCTTGCAACATACCGATTGATAAGGATGTCCTCTTTCCCAATGACACAGCAATCCTTCAGGTTGCTCAAACAGATAAGATGGTGGAATATCCTCTGCAATACAGGGAGAAAGGGATCGTAGCTCGTGATGCTGATGTAGAGGGTCAGGCAAGCAGATTAGTGTCGCTGCAGCGATATCGTGAAAAGCGAAAGGACAGGGGAAGATCCAAGGGCAACAAACTGACTGGCATAACTTCATCTAACTTTGAGATGTATTTGAACCTTCCAGCGAAGCTCCATGCCTCAAATGGTAATTCAAGTCGTAGTAGCACTGACTCTCCACCACAGCCTAGACTGCCTCTAGTTTCCGGTGGCTCAGCTGAAAACCAGCCAAAAGTTACCCTTCCCATTGATTTGAATGATAAAGATGTTCAAGAATGCTAA 1023 0.479 MNGGTTLTSVRSILDKPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTADDLPAPVGVSSAIHHHHHHHPQPPQRNLNEAPAKGADPDDTGFHAVEDLKKSTTSTAAEKATETNDANVVKLSGGCAASGSFGQMTIFYCGKVNVYDGVSPDKAQSIMQLAACPSSFPQDNLLNKNAAVWASPCNIPIDKDVLFPNDTAILQVAQTDKMVEYPLQYREKGIVARDADVEGQASRLVSLQRYREKRKDRGRSKGNKLTGITSSNFEMYLNLPAKLHASNGNSSRSSTDSPPQPRLPLVSGGSAENQPKVTLPIDLNDKDVQEC* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0650 340 Pfam Jas motif 249 266 IPR018467 -
Tpr1g0650 340 Pfam tify domain 152 180 IPR010399 -
Tpr1g0650 340 MobiDBLite consensus disorder prediction 81 104 - -
Tpr1g0650 340 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 316 IPR040390 -
Tpr1g0650 340 MobiDBLite consensus disorder prediction 295 310 - -
Tpr1g0650 340 ProSiteProfiles Tify domain profile. 146 181 IPR010399 -
Tpr1g0650 340 SMART tify_2 146 181 IPR010399 -
Tpr1g0650 340 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 8 316 - -
Tpr1g0650 340 MobiDBLite consensus disorder prediction 295 340 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0650 7 295 Tify Gene Family AT4G14720 44.518 8.82e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tpr1g0650 tify 6.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0650 - - gmx:100808970 459.144