Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0646 ATGGGAAAAAAAGGTAAATGGCTTAAAAACTTCTTAACAGGGAAGAAGGACAAAGAAAAAGAGAAAGAAAACCAGAATTTCTCAAATGGAACAGAAAATCCAACAACTCCAGTTTCAACAACAACAAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCATCAGCAACAGCTACACCAACAGTTTCCAAGGAATTGAATAACTCAGATGTTATTGCTTCAATGACAGTGCAAAGTACTGTCACTGATATTCAGAATGAGCAGAGGAATCATGCCGTGGCTGTAGCTGTTGCTACGGCCGCGGCAGCTGATGCAGCGGTTGCGGCTGCACAAGCTGCGGCTGCTGTGATCCGCTTGACTTCTGGTTCAAATGAGACTTTTAGTTCTAGAAGTATTGAAGATTCTGCTGCTGTTAAAATTCAATGCGTCTTTCGATCTTACTTGGCAAGAAAGGCATTGTGTGCTCTAAGAGGATTAGTGAAGTTGCAGGCACTGATAAGGGGTCACTTGGTGAGAAAACAGGCTAAGGCGACACTTAGATGTATGCAGGCTTTGGTCACAGCACAAGCTAGAGCTCGTGCTCAAAGGATTCGAATGGTGTCGGAAGGAAAGCCTAGTCCAAATCAATCAACTCACAGAAATGCTATGGAAAATGACTTGTTCAGGCAAATATATAATGAAATGGACAGAAGCTTGGAGGACAACATCAAGATTGTGGAAATGGACTTTTGTGAATCAAAAGGTAACTCTACAAGCAGAAGCAGCAGTGTATATAATCATGGACAACATTATGAACAATCTGAACATAGATATTCCACAAATGGTTCCTACTCAAAAGAAGAAAACTACAAAGTATCACCAGCTCCATCAGTTTTAACAGAATTGAGTCCAAAAACAGGCAGTGGCCATTTTGAAGATTGTTTCAGTACAGCTCAAAACAGCCCTCAATGCTATTCTGCAAGATCGAAAACCGATGGTTCAATTTCAAATCTTCCTTTTTCTTTCCCTAGGCCATCTTATGCAGAACCTATGTCCTATGATTACCCTTTATATCCAAGCTACATGGCTAATACAGAATCATCAAGGGCTAAAGTTAGATCACAAAGTGCACCAAAACAAAGACCAGATTCTTTTGAGAAGCAACCAAGCCGACGAAGAATTTCGGTTGAGGGAAGAAATGTACCTAGGCCAGTGAGGATGCAAAGGTCATCTTCACATGTAGGTGCAGCTGCTCAGAATTACCATTATCCATGGTCAATCAAGCTTGATAGATCCGCAGTTTCGCTCAAAGATAGTGAGTGTGGCTCGACAAGTACAATGCTCACAAATACTAATTACTGCAGATCCCTTGTTGCATATGATCCAGATGGAGATAGGTACTAA 1380 0.4109 MGKKGKWLKNFLTGKKDKEKEKENQNFSNGTENPTTPVSTTTKEKKRWSFRRSSATATPTVSKELNNSDVIASMTVQSTVTDIQNEQRNHAVAVAVATAAAADAAVAAAQAAAAVIRLTSGSNETFSSRSIEDSAAVKIQCVFRSYLARKALCALRGLVKLQALIRGHLVRKQAKATLRCMQALVTAQARARAQRIRMVSEGKPSPNQSTHRNAMENDLFRQIYNEMDRSLEDNIKIVEMDFCESKGNSTSRSSSVYNHGQHYEQSEHRYSTNGSYSKEENYKVSPAPSVLTELSPKTGSGHFEDCFSTAQNSPQCYSARSKTDGSISNLPFSFPRPSYAEPMSYDYPLYPSYMANTESSRAKVRSQSAPKQRPDSFEKQPSRRRISVEGRNVPRPVRMQRSSSHVGAAAQNYHYPWSIKLDRSAVSLKDSECGSTSTMLTNTNYCRSLVAYDPDGDRY* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0646 459 MobiDBLite consensus disorder prediction 376 391 - -
Tpr1g0646 459 PANTHER IQ-DOMAIN 5-RELATED 1 436 - -
Tpr1g0646 459 MobiDBLite consensus disorder prediction 360 405 - -
Tpr1g0646 459 ProSiteProfiles IQ motif profile. 156 183 IPR000048 GO:0005515
Tpr1g0646 459 MobiDBLite consensus disorder prediction 27 43 - -
Tpr1g0646 459 SMART iq_5 131 153 IPR000048 GO:0005515
Tpr1g0646 459 SMART iq_5 154 175 IPR000048 GO:0005515
Tpr1g0646 459 MobiDBLite consensus disorder prediction 360 375 - -
Tpr1g0646 459 Pfam Protein of unknown function (DUF4005) 313 390 IPR025064 -
Tpr1g0646 459 ProSiteProfiles IQ motif profile. 132 160 IPR000048 GO:0005515
Tpr1g0646 459 MobiDBLite consensus disorder prediction 10 26 - -
Tpr1g0646 459 Gene3D - 132 183 - -
Tpr1g0646 459 Pfam IQ calmodulin-binding motif 159 175 IPR000048 GO:0005515
Tpr1g0646 459 Pfam IQ calmodulin-binding motif 134 152 IPR000048 GO:0005515
Tpr1g0646 459 MobiDBLite consensus disorder prediction 249 268 - -
Tpr1g0646 459 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 436 - -
Tpr1g0646 459 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0646 Tpr-Chr1 5416696 5419455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0646 1 449 IQD Protein Family AT4G14750 45.064 3.95e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0646 - - gmx:100817667 617.076