Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0640 ATGGAAGGAACTACAAGCTATTCCAAATCAGAGGGTGGTGTTGACTTGACTCAAATATCTCTTCGACCCATTAGTCTTACTGATCTTGATGACCTAAAATTGTGGACCGGTGATGAAAAAGTGGCCAGGTATTGCACCTGGGAACCTTATACCAGCAAAGAAGAAGGCATCAACTTCATCCAAAACATAGCAAGCAAATCTCTATGGTTCAGAGCAATTTGCCTTCACAACCGTGCAATTGGATGCATCGATTTTCGGTCGGATAACTATAGATGCAAGGAAAAATCTGCTGAACTTGGCTATGCTCTGAGCTCCATGTACTGGAACAAAGGGATTGCCACAATGGCTGTGAAACAAGTGGTTGAAGCTGCATTTAAGGAGTTTCAACACTTGGAGAGGCTTGAAGCTCAAGTCGATGTGGAAAATGTTGCTTCTCAGAAGGTGCTGGAGAAGGCTGGTTTTCGAAGGGAGGGAGTTCTCAGGAAATATTCCTTCATCAAGGGAAAAAGTAGAGATATGGTTATGTTCAGTGTTGTATCAAATGATCTTCAACTTTGA 558 0.4247 MEGTTSYSKSEGGVDLTQISLRPISLTDLDDLKLWTGDEKVARYCTWEPYTSKEEGINFIQNIASKSLWFRAICLHNRAIGCIDFRSDNYRCKEKSAELGYALSSMYWNKGIATMAVKQVVEAAFKEFQHLERLEAQVDVENVASQKVLEKAGFRREGVLRKYSFIKGKSRDMVMFSVVSNDLQL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0640 185 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 172 IPR000182 GO:0016407
Tpr1g0640 185 Gene3D - 14 184 - -
Tpr1g0640 185 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 11 183 - -
Tpr1g0640 185 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 11 183 - -
Tpr1g0640 185 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 19 178 IPR016181 -
Tpr1g0640 185 Pfam Acetyltransferase (GNAT) domain 20 155 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0640 Tpr-Chr1 5379409 5380367 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tpr1g0640 Acetyltransf_3 1.7e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0640 - - gmx:111043201 280.411