Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0634 ATGAAGACACCACCCTTTTCCAACTTAGAAGAGGTCTCTGAGACAAAGGAAAGACAATCGGGGCCATCCGAGGCTGACGATGGGGATATTAATGAACTTCCCATGGTCCCTCCATCACGGAAAAGATGTATTAATCTTAACGTCTCTCCTTCAAATTCTGACGAGTCTTCCGAAAGGAATACTGAAATACCAAGCAGCACTTCTTCTGTTCCTTTTCCTGCGAGCCAGCCAGAAAAAACCCTGTCTCAAGTCTCTGAGACAAAGGAAAGACAATCGGGGCCATCCAAGGCTGACGATGGGGATATTAATGAACTTCCCATGGTCCCTCCATCACGGAAAAGATGTATTAATCTTAACGTCTCTCCTTCAAATTCTGACGAGTCTTCCGAAAGGAATACTGAAATACCAAGCAGCACTTCTTCTGTTCCTTTTCCTGCGAGCCAGCCAGAAAAAACCCTGTCTCAAGTAGCTGAATCAACGGAAATAAAATGTGATTGCTGCTATATTAAATGCGATAATTATATTTGTCGATGTCGTCAGGCTCGTGTTTATTGCTCCCCACTTTGCACATGTAGCGATTGCCAAAACAAACCAGAAGCGTTACAGCTTTCCAGTACTTCTTTGCCTCTTTCATCCAGCCAAGTGCATTCAATGTCGCAAGGTCCCGCATTATTGGAGAGCCATTTGAGGCCATCTGCGATCGGTGTTCAAACTACTAAAGAATTCGCCCCCTCGTTAACGCTTCAAATTGCTGGTGAAAGTTCCAATAAGAGTATCCTCAAAGAGGAGAGAATATGTAAATGTAGAAAAACAAAATGCTTGTCCCTTGTATGTCCGTGTCTTAGTTGTTCACTCAGATGCACCGAAAATTGCGAATGTGCTATTGAATGCATGAATAAAGAGGGTAATGAAGCATTAATTCTGCAAGCTCGCATGGCAGTAGGATGTAGTTGCAGTAAAACAAGCTGCAAGATCCAAAAATGCTCATGTTTTCAGGTCGGTGTTGGTTGCTCCCTAATCTGTACTTGTCAAGGGTGTGAAAATATTCACGGTAGAAAGGATAGGACAGCTTAA 1074 0.432 MKTPPFSNLEEVSETKERQSGPSEADDGDINELPMVPPSRKRCINLNVSPSNSDESSERNTEIPSSTSSVPFPASQPEKTLSQVSETKERQSGPSKADDGDINELPMVPPSRKRCINLNVSPSNSDESSERNTEIPSSTSSVPFPASQPEKTLSQVAESTEIKCDCCYIKCDNYICRCRQARVYCSPLCTCSDCQNKPEALQLSSTSLPLSSSQVHSMSQGPALLESHLRPSAIGVQTTKEFAPSLTLQIAGESSNKSILKEERICKCRKTKCLSLVCPCLSCSLRCTENCECAIECMNKEGNEALILQARMAVGCSCSKTSCKIQKCSCFQVGVGCSLICTCQGCENIHGRKDRTA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0634 357 PANTHER TESMIN/TSO1-RELATED 137 303 IPR028307 -
Tpr1g0634 357 PANTHER TESMIN/TSO1-RELATED 254 353 IPR028307 -
Tpr1g0634 357 MobiDBLite consensus disorder prediction 116 149 - -
Tpr1g0634 357 MobiDBLite consensus disorder prediction 11 25 - -
Tpr1g0634 357 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 315 348 IPR005172 -
Tpr1g0634 357 MobiDBLite consensus disorder prediction 1 149 - -
Tpr1g0634 357 PANTHER - 137 303 - -
Tpr1g0634 357 PANTHER - 254 353 - -
Tpr1g0634 357 ProSiteProfiles CRC domain profile. 262 351 IPR005172 -
Tpr1g0634 357 MobiDBLite consensus disorder prediction 44 90 - -
Tpr1g0634 357 SMART CXC_2 261 303 IPR033467 -
Tpr1g0634 357 SMART CXC_2 159 200 IPR033467 -
Tpr1g0634 357 SMART CXC_2 311 352 IPR033467 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0634 266 354 CPP Transcription Factor Family AT3G22780 33.333 1.07e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Tpr1g0634 TCR 8.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0634 - - gmx:100804447 95.9005